Paenibacillus lycopersici: GXP70_12390
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Entry
GXP70_12390 CDS
T07013
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plyc03021
]
GXP70_12390
Transcription machinery [BR:
plyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXP70_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
HTH_23
HTH_28
HTH_38
RovC_DNA-bd
CENP-B_N
UPF0122
DUF6115
Motif
Other DBs
NCBI-ProteinID:
QHT60659
UniProt:
A0A6C0G0D7
LinkDB
All DBs
Position
2790489..2791028
Genome browser
AA seq
179 aa
AA seq
DB search
MAIGQLYHHSGGVTIMQMGQATPDNYRRSRKMVRALHARTQDKAQRSLIAEMIGDCDYAI
EWMETGRRPGSVRGVERPMRISSWDPDWIDRYASPNARYVIERDSSSRDLTADERFRIEE
AMRDLTDRERQCFMLHVVDGMSYEDIGRELHLGRSTVQVYIERSREKIEYAKLTNLFLV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcggacaactgtaccaccacagcggaggcgtgacgatcatgcagatggggcag
gcgacgccggacaattaccgtcgatcccgcaagatggtcagggcgctgcatgcgcgtacg
caggacaaggcccagcgcagcctgattgccgagatgatcggcgactgcgattacgcgatc
gagtggatggagaccggccgccggcccggcagcgtccgcggtgtcgagcggcctatgcgt
atcagcagctgggacccggactggatcgatcggtatgcgtctccgaacgcgcgctacgtg
atcgagcgcgattcatcttcccgggacttgacggccgatgagcgcttccgcatcgaggag
gccatgcgggacttgacggaccgcgagcggcaatgtttcatgcttcatgtggtggacgga
atgtcctatgaggacattggacgggaattgcacctggggaggagcacggtgcaagtctac
atcgaaaggtcgcgggagaaaattgaatatgcgaaactgacgaacctcttccttgtataa
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