Paenibacillus lycopersici: GXP70_12820
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Entry
GXP70_12820 CDS
T07013
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plyc03016
]
GXP70_12820 (truB)
Enzymes [BR:
plyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GXP70_12820 (truB)
Transfer RNA biogenesis [BR:
plyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GXP70_12820 (truB)
Prokaryotic type
GXP70_12820 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QHT60741
UniProt:
A0A6C0FZ44
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All DBs
Position
2879233..2880156
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AA seq
307 aa
AA seq
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MIDGILAVWKPAGWTSHDVVAKVRGILKVKRIGHTGTLDPQVTGVLPLCVGRATRVVEYV
QERPKSYEAVMRFGLSTDTEDMTGTVTNELPSVSLTEARIREVLASFIGEIDQVPPMFSA
VRVDGKRLYELAREGQVIERQSRKVSIYELELLEAQLDQPHPVIRFSVVCSKGTYIRTLC
VDIGAALQVPAVMVKLIRTMSGGFTQTDCLTLEEIARHKADGTIADKLTALDEALDHFPK
ITISDSDVRHAFQGKRVPLRNIVAHDPYENDSLLRVYGADGMFAGVFQPDAESGTLKAVK
VFTPTAD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacggcattctggcagtttggaaaccggccggctggacctctcatgatgtcgtg
gcgaaagtcagaggcattctgaaggtgaaacgtatcggccatacgggcacgctggatccg
caagtgacaggcgttctcccgctctgcgtcggacgcgcgactcgcgtggtggagtacgtg
caggaacgccccaaatcgtacgaagccgtcatgcggttcggactgtcgacggatacggaa
gacatgacggggactgtgacgaacgagctgccttcggtctcgctgacggaagcccggatc
cgggaagtgctggcctcgttcatcggcgaaatcgatcaggtgccgccgatgttctcggcc
gtgcgggtcgacggcaaacggctgtacgagctggcgcgggaaggtcaagtgatcgagcgg
caatcccgcaaagtgtcgatatacgagctggagctgcttgaagcgcaattggatcagccg
cacccggttatccgcttctcggtcgtttgttcgaaagggacgtacattcgtacgctgtgc
gtcgatatcggcgcggcgcttcaagtgcctgccgtgatggtgaagctgattcggacgatg
tcgggcggattcacgcagacggactgtttgacgctcgaagaaatcgcgcggcacaaagca
gacggcacgatcgcggacaagctgacggcgctggacgaagcgttggaccattttccgaag
attacgatcagcgattcggacgtgcggcacgccttccaaggaaagcgtgtcccgctgcgc
aatatcgtcgcgcacgatccatacgagaacgattccctgcttcgcgtatacggagcagac
ggaatgttcgcgggcgtctttcaaccggatgccgaatccggcacgctcaaagccgtcaag
gtatttacgccgacggcagactag
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