Paenibacillus lycopersici: GXP70_13080
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Entry
GXP70_13080 CDS
T07013
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03420
Nucleotide excision repair
plyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXP70_13080
03430 Mismatch repair
GXP70_13080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_13080
Enzymes [BR:
plyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP70_13080
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXP70_13080
MMR (mismatch excision repair)
Other MMR factors
GXP70_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
PhoH
DEAD
AAA_16
nSTAND3
NACHT
Catalase_C
ResIII
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QHT60788
UniProt:
A0A6C0FUG0
LinkDB
All DBs
Position
2937961..2940054
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AA seq
697 aa
AA seq
DB search
MTVQSAFQEEAKRIDEVLRSIRKQLREIGPRYTGNDFTEQMLEIQREQREQRLTVAEREP
YFGRIDFQEEAQPAPKPLYIGKAGVAHEQSNEVLVVDWRAPVASLFYAFSGGEAPVVYES
PDGDVEGTVHLKRNLMVRGGILERVVDSYVRGQEDESVTDEFLLYRLGENKDNKLRDIVS
TIQQEQDRIIRTEKNKAVFIQGVAGSGKTTVALHRLAYLLYRYAGNIRADRMVIFAPNRM
FLDYISGVLPELGVGDIMQTTFADWSLEQLRQAVRLDEAYDPMNYWFEQPRTRDELLAST
GRIKGSLAFKAIVDAKLALTEAALIPEEPFEPMAGWRVTPAMIAEWLATDDGSEPFMKRR
DRLVSRLKRWLESEWKARRQTDGKLKAKLNAKLNAYAKKIPSPTAAQLYGALLGEPAAKE
LLPAKSCAATIKLLKGKLVWPEDLAPLVYIHVRLNGFDGSPYDHVVIDEAQDYSPFQLEA
LKQCQRQPSMTVLGDLQQGIHGYAGIHSWTELTALFPEADTGYYELDRSYRSTMEIIDFA
NRVLGGMGDGVKPAVPVFRSGEAVDVVRMGSDEQRLHDVVQTVRDWQQSGHYRTIAVLGR
NIRSCEAIARALADAGIEAALVQSKQEAYGGGLTVVPAYLAKGLEFDAVLVADADDGSFG
GNDAKLLYVACTRALHKLKLLYCGELTSLISEPAAVV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcaaagtgcctttcaagaagaggcgaagcgcatcgacgaggtgctgcgcagc
atccgcaagcagctgagggaaatcggccctcgttacaccggcaacgatttcaccgagcag
atgctggagatccagcgcgagcagcgggagcagcggctgaccgtcgccgagcgcgagcct
tattttggccgcatcgattttcaagaagaagcgcagcctgcgccgaagccgctctatatc
ggcaaggcgggcgtcgcccatgaacagtcgaacgaggtgctcgtcgtcgattggcgcgcg
cccgtcgcgagcctgttctatgcgttcagcggcggcgaagcgcccgtcgtctacgaatcg
ccggacggcgacgtggaaggaaccgttcatctgaagcgcaacctgatggtgcgcggcggc
attctggagcgggtcgtggacagctacgtgcgaggccaggaagacgagagcgtgacggac
gaattcctgctgtaccggctcggtgagaacaaggacaacaagcttcgcgacatcgtctcg
acgattcagcaggagcaggaccgcatcatccggacggagaagaacaaagccgtcttcatt
caaggggtggcgggaagcgggaagacgaccgtcgcgctgcatcggctcgcctatttgctt
taccgttacgccgggaatatccgcgcggaccggatggttattttcgcgccgaaccggatg
ttcctcgattatatttccggcgtgctgcccgaactcggcgtcggtgatattatgcagacg
acgttcgcggactggtcgctggagcagctgcggcaggccgttcgtctcgacgaagcgtac
gacccgatgaattactggttcgagcagccgcggacgcgcgatgagctgctggcatcgaca
ggccgcatcaaaggcagcctcgcgttcaaagcgatcgttgacgcgaagctggcactgacg
gaagcggcgcttatcccggaggagccgttcgagccgatggcgggctggcgcgtgacgccc
gcgatgatcgcggaatggctggcgaccgacgacggcagcgagccattcatgaaacgccgc
gaccggcttgtcagccgcctgaagcgctggctggagtcggagtggaaggcgcgccgccag
acggacggcaagctgaaggccaaactgaacgcgaagctgaatgcgtacgcgaagaaaatc
ccgtcgccgacggccgcgcagctgtacggcgcgctgctcggcgagccggccgccaaggag
ctgctgccggccaagagctgcgccgcgacgatcaagctgctgaagggcaagctggtctgg
ccggaagatctggctccccttgtctacatccacgtgcgcttgaacggattcgacggttcg
ccgtacgatcacgtcgtcatcgacgaggcgcaggattactcgccgttccagctcgaagcg
ttgaagcaatgccagcgccagccgtcgatgaccgtgctcggcgatttgcagcaaggcatc
catggctacgccggcattcacagctggacggagctgacggcgctcttccccgaagccgat
accggctattacgagctggaccggagctaccggtcgacgatggaaatcatcgatttcgcc
aaccgggtgctcggcggcatgggcgacggcgtcaagcctgccgtgccggtcttccgcagc
ggcgaagcggtcgacgtcgtgcggatgggctccgacgagcagcgtctgcacgacgtcgtg
caaacggtccgcgactggcagcaatcggggcactaccggacgatcgccgtgctgggccgc
aatatccgctcctgcgaggcgatcgcgcgggcgctggcggatgccggcatcgaggcggcg
ctggtgcagagcaagcaggaagcgtacggcggcgggttgaccgtcgtgccggcttatttg
gccaaagggctggagttcgacgccgtgctcgtggccgacgccgatgacggcagcttcggc
ggcaacgacgcgaagctgctgtatgtcgcctgcacccgcgcgctgcacaagctgaagctg
ctctactgcggcgagctgacgtcgttgatctcggaaccggcggctgtcgtgtaa
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