Paenibacillus lycopersici: GXP70_15535
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Entry
GXP70_15535 CDS
T07013
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plyc03032
]
GXP70_15535
03036 Chromosome and associated proteins [BR:
plyc03036
]
GXP70_15535
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_15535
DNA replication proteins [BR:
plyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GXP70_15535
Chromosome and associated proteins [BR:
plyc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GXP70_15535
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GXP70_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
RuvA_C
DUF937
Motif
Other DBs
NCBI-ProteinID:
QHT61229
UniProt:
A0A6C0G1X7
LinkDB
All DBs
Position
3496804..3497103
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AA seq
99 aa
AA seq
DB search
MNKEQLVEVVAKSSGFSKKNAEKAVAHVLDSILEALLQGEEVQLVGFGKFDVRYREARTG
RSRKTGEDIELPAGKVPVFTAGLAMKKALNAPRYRTTQG
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaacaactggtggaagtagtggcgaagagcagcggattctcgaagaaaaac
gcggaaaaagccgtagctcatgtgctcgactcgattctggaggcgttgctgcaaggcgag
gaggtgcagctcgtcggcttcggcaaattcgatgtccgttatcgcgaagcgcgaacgggt
cgaagccgcaaaaccggggaagatatcgagcttccggcgggcaaggtgcccgtattcacg
gctggcctcgccatgaaaaaagctttgaacgctccgaggtaccgcacgacgcaaggataa
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