Paenibacillus lycopersici: GXP70_17900
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Entry
GXP70_17900 CDS
T07013
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GXP70_17900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_17900
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GXP70_17900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_22
LPD22
Motif
Other DBs
NCBI-ProteinID:
QHT61658
UniProt:
A0A6C0FX59
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All DBs
Position
complement(4077327..4079318)
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AA seq
663 aa
AA seq
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MNQTTMNALEFQKIKSMLAAYTVSEAGKALVERLEPSSRLKQVTAWLNETEEAAKLLATG
ASVPLSAMEGIGPFMALLGKGRIYTEQELGQLAAWLTSVAQMKRYMDSKRMTAPTISSYA
DSMHDCPELIQELARCIRHGVLTDQASPYLADIRRHIAAAEDRIERKINQLLGKYKHALQ
EQLVSKRNGRFVIPVKRDLRRQVPGTVWDESSSGQTLFVEPADVADLQGELQLWKSEEER
ERMLILSRLSDEAEAYAAEFRWNVEAMASFDFIFARGKLGRTYGGIAPAVTDRPYIRLTG
ARHPLLGEKAVPLTVEIGGDWRQLIITGPNTGGKTVALKTIGLFALMVQSGLLLPADKGT
ELGLFETVLADVGDGQSIERSLSTFSAHMDNLSGMLRKANGRSLLLLDELAAGTDPGEGI
ALSIAVLEELLQRGSLVAATTHFNEIKRFASVMEDCTNARMAFDAETLKPLYRLEIGEAG
DSYAFAIARRFGLPESVVRRAEQRVKQAAAPSETDSPEGQRGQYADSQSYEFPQYNAVQR
ERKQQPARMKPADPVEALPDTEGKKRPFEVGDCVWVYPLKRTGIVFRAADERGEVVVQVQ
KSKMTFNRKRLSLYIPNTELYPGGEYDMDIVFESKENRKKRKLMGRKYSPGVSIVTPSEK
KDE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacgacgatgaacgcgttggaatttcaaaaaatcaaatcgatgctcgcagcg
tacacggtatcggaagcagggaaagcgctggttgaacggctcgaaccgagcagccggctc
aagcaagtaacggcatggctgaacgaaacggaagaggcggcgaagctgcttgcgacggga
gcgagcgttccgctttcggcgatggaaggcatcggcccgttcatggcgctgctcggcaaa
ggccggatttataccgaacaggagctcgggcagctggcggcctggctgacatcggtcgcg
cagatgaagcgttacatggacagcaagcgcatgacggcgccgaccatcagcagctacgcc
gactcgatgcatgattgcccggagctgatccaagagctcgcaagatgcatccgccacggc
gtgctgaccgatcaagccagtccttatctggctgatatccgccgccacatcgcggcggcc
gaagaccggatcgagcgcaaaatcaatcaattgctcggcaaatacaagcatgcgctgcag
gagcagctggtcagcaaacggaacggacgcttcgttattcccgtcaaacgcgatttgcgc
aggcaggtgccgggcaccgtctgggatgagtcgtccagcggccagacgctgttcgtcgag
cccgccgacgtggcggacctgcaaggcgagctgcagctctggaagagcgaagaagaacgc
gagcggatgctgatcttgtcccgcctgtcggacgaggcggaggcatatgccgccgagttc
cgatggaacgtggaggcgatggcatcgttcgattttattttcgccaggggcaagcttggc
cgcacgtacggcggcatagcgccggccgttaccgatcggccgtacatccgcttgacgggc
gcgcgccatccgctgcttggcgagaaggcggttcccctcaccgtggagatcggcggggat
tggcggcagctcatcattacgggaccgaataccgggggcaagaccgtcgcgctgaagacg
atcggcctgttcgcgctgatggtgcagtcgggcttgctgctgcccgcggataaagggacg
gagctgggattgttcgagaccgtgctcgcggacgtcggggacgggcaaagcatcgaacgg
tcgctcagtacgttctcggcgcatatggacaatttgagcggaatgctccgcaaggcgaac
ggccgctcgctgctgctgcttgacgagctggcggcgggcacggatcccggcgaaggcatc
gccttgtcgatcgccgtgctggaggagctgctgcagcgcggttcgcttgtggcggcgacg
acgcattttaacgagattaaacgattcgcttccgtcatggaagactgcacgaatgcaaga
atggccttcgacgcggagacgctgaagccgctgtaccgcttggaaatcggcgaggccggg
gacagctacgctttcgccatcgccagacgcttcggattgccggagagcgtcgtgcggcga
gcggaacaacgggtgaagcaggcggcggcaccgtcggagacggatagccccgaaggccag
cgcggccagtacgcggattcgcaatcgtacgaattcccgcaatacaatgcggtgcaacgc
gaacgcaagcagcagcctgcgcgaatgaagccggccgatccggtagaagcactccccgac
acggaaggaaagaagcgcccgttcgaagtcggcgattgcgtctgggtgtacccgctcaaa
cgaacgggcatcgtcttccgcgcggccgacgaacgcggggaggtcgtcgtgcaggtgcag
aagtcgaaaatgaccttcaaccggaaacggctgtcgctttacatcccgaacaccgagctg
tacccgggcggcgagtacgatatggatatcgtgttcgagtccaaagagaaccggaagaaa
cggaagctcatggggcgcaagtactcgccgggggtatcgattgtcacgccgtcggagaaa
aaggacgaatga
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