Paenibacillus lycopersici: GXP70_17985
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Entry
GXP70_17985 CDS
T07013
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plyc03016
]
GXP70_17985 (rnz)
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GXP70_17985 (rnz)
Transfer RNA biogenesis [BR:
plyc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GXP70_17985 (rnz)
Prokaryotic type
GXP70_17985 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
DUF6200
HMD_N
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QHT61674
UniProt:
A0A6C0G2V8
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All DBs
Position
complement(4097071..4098009)
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AA seq
312 aa
AA seq
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MQLIFLGTSAGRPTRSRNVTSIALSLPEPHCGFWLFDAGEGTQHRMLGSKLKLNKLERIF
VTHLHGDHIYGLPGLLSSRSYFEGAGPLTIYGPPGIRSYLEQTFELTGVHLGYELHIVEI
AEGEVAADERYLVEAAALEHRLPCFGYRITERPQSGQLNLKRLAELGVPAGPLFGKLKRG
EDVTLECGTTISAADVVGQPHPGRVVTILGDTRPCENAVKLACSADLLVHEATFAGGLEE
KAAAYGHSTFTQAAEIAKAANAKRLVVTHFSSRYDDEEVAELANGAKAIFERIEPAVEMA
EINVPRLPLTNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgcagctcatatttctcgggaccagcgcaggaaggccgacacgctcccgcaacgtgacg
tcgatcgccttgtcgctgcctgaaccgcattgcggcttctggctgttcgacgcgggcgag
ggcacgcagcaccggatgctcggcagcaagctcaagctgaacaagctggagcggattttc
gtcacgcacctgcatggcgatcatatatacggtttgcccggtctgctaagcagccggagt
tatttcgaaggcgcgggtccgttaacgatctacgggcctcccggcatacggtcgtacttg
gaacaaaccttcgagttgaccggcgttcatctgggctatgagcttcatatcgtcgagatt
gccgaaggcgaagtcgccgccgacgaacgttatctcgtggaagccgccgcgctcgagcat
cgtctgccgtgcttcggctaccgcattacggagcgtccgcagagcggtcaattgaacctg
aagcggctcgccgagctcggcgttccggccgggccgctgttcggcaagctgaagcgcgga
gaagacgtaacgctggaatgcggcacgacgatatcggcagccgatgtcgtcggccaaccg
catccgggccgcgtcgtgacgatcctcggcgacacgcggccctgcgagaatgcggtgaag
ctcgcctgcagcgccgatctgctcgtgcacgaagcgacgttcgccggcgggctcgaggag
aaggcggccgcgtacggtcattcgaccttcacgcaagccgccgaaatcgccaaagccgcg
aacgccaaacggcttgtggtgacgcatttcagctcgcgctacgacgacgaggaagtcgcg
gagctggcgaatggcgcgaaggcgattttcgaacggatcgagccagccgtcgaaatggcg
gaaatcaacgtgccgaggctgccgcttacaaattcgtaa
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