Paenibacillus lycopersici: GXP70_20480
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Entry
GXP70_20480 CDS
T07013
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K01308
g-D-glutamyl-meso-diaminopimelate peptidase [EC:
3.4.19.11
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plyc01002
]
GXP70_20480
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.11 gamma-D-glutamyl-meso-diaminopimelate peptidase
GXP70_20480
Peptidases and inhibitors [BR:
plyc01002
]
Metallo peptidases
Family M14: carboxypeptidase A family
GXP70_20480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M14
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
AstE_AspA_cat
Phage_tail_X
Motif
Other DBs
NCBI-ProteinID:
QHT64030
UniProt:
A0A6C0G8F0
LinkDB
All DBs
Position
complement(4634600..4635820)
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AA seq
406 aa
AA seq
DB search
MPYVVQPGDTLLRIARMFNVNKESLLAANPGLSSAKPLSPGLLLSVPAQTAFIYRVQPGD
TLLGIACKFGLSLQDIISANRHQELKQLLPGALLTMPCAGSGRIVDGRAEYGQRELTADA
EALLKAYPFLQVEKIGASVMGKPLIAIRLGEGPIKLHVNAGMHANEWITTPLLMTFLEDA
ARAASSGEKLCGIDMQALLQRVTLWVVPLVNPDGAELAQEGLRPDHPHAAELLRWNKGSD
RFNKWKANIRGVDLNDQFPAFWEEETSRRGNDGPGPRDYPGPNPLSEPEARALAEFTAEQ
RFDLVVALHTQGQEIYWNYRGYEPPESERIARKLGKDSGYKPVKLSGSDAGYKDWFILQF
RKPGFTVEIGYGVNPLPVEAFPDLYDEVRMLLAAALEAARAQEKQE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
ctgccttatgtcgtgcagcccggcgatacgctccttcgcatcgcccgcatgttcaacgtc
aacaaggaatcgctgcttgcggcgaatcccggattgtcctccgccaagccgttgtcccca
ggccttctgctgtccgttcccgcgcagacggcttttatttaccgcgtgcagcccggcgat
acgctgctcgggatcgcatgcaaattcggcctgtcgctgcaagatattatcagcgcgaac
cggcatcaggagctgaagcagcttctgccgggggcgctgctgacgatgccgtgcgctggc
agcggacggatcgtggacggccgcgccgaatacggacagcgcgaactgacggccgatgcc
gaggcgctgttgaaggcctatccgttcctgcaagtcgagaagatcggcgcaagcgtcatg
ggcaagccgttaatcgcgattcggctcggcgaaggcccgatcaagctccacgtcaatgcg
ggaatgcatgccaacgagtggatcacgacgccgctcttgatgacgttcctcgaggatgcg
gccagggcggcctcgtccggcgagaagctctgcggcatcgacatgcaggcgctgctgcag
cgggtgacgctttgggtcgtgccgctcgtcaatcccgacggcgccgagctggcccaggag
ggcctgcggccggatcatccgcatgcggcggagctgctccgttggaataagggctccgac
cggttcaacaagtggaaggcgaatattcgcggcgtcgatctgaacgatcaattcccggcg
ttctgggaggaggagacgtccaggcgcggcaacgacggcccgggaccgcgcgattacccc
ggcccgaacccgttgtcggagccggaagcgcgagcgctggccgaattcacggccgagcag
cgattcgatctcgtcgtcgccctgcatacgcagggacaggagatctattggaactaccgg
ggctacgagcctcccgaatcggaacggatcgcgcgcaagctcggtaaggacagcggctat
aagcccgtgaagctgtcgggcagcgacgcgggctacaaggactggtttattttgcaattt
cgcaaacccggatttaccgtggagatcggatacggcgtcaatccgctgccggtcgaggcg
ttcccggatttatacgacgaagtgcgaatgctgctggcggccgctttggaggcggcccgt
gcgcaagagaagcaagaatga
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