Paenibacillus lycopersici: GXP70_23840
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Entry
GXP70_23840 CDS
T07013
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plyc03021
]
GXP70_23840 (sigI)
Transcription machinery [BR:
plyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXP70_23840 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
HTH_11
HTH_DeoR
HTH_23
GntR
Xre-like-HTH
HTH_28
HTH_17
HTH_7
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QHT62710
UniProt:
A0A6C0G629
LinkDB
All DBs
Position
complement(5443960..5444784)
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AA seq
274 aa
AA seq
DB search
MLLVLFKRIFGGKHDTSAVTPETRIAPEEMVERIRSGEASRNAFIDAYQPYIAKVTSRFC
KRYIDPASSDEFSIALAAFDEAIGQFSSQAGKSFLGFAETVIRRRLIDYVRKESRHHGSV
PYSAFDQDDEEESTVNAIETNEAMNRYSLTQESEARRFEIAEFDGRLREYGITFGELPDI
SPKHSDSRQLLIGISRRLANDPELYDQLETKQKLPIKELCEIIGVSRKTIERNRKYIIAL
TILHNGDFPYLQQYIKPQEPPVHKELPAVEGVRA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgttactcgttctgttcaaacgaattttcggcggcaagcatgatacgtccgcagtcacc
cccgagacccgaatcgctcccgaagagatggtggagcggattcgcagcggcgaagcgtcg
cgaaatgcgttcattgacgcttatcagccttatatcgccaaggtgacgagtcgattttgc
aagcgatatatcgatcctgccagctcggatgaattcagcatcgcgctggccgcttttgac
gaagcgatcggacaattctcaagtcaggcaggtaaatcgttcctcggcttcgccgaaacg
gtcatccggcgcaggcttattgactatgtccgaaaagaaagcaggcatcacggttccgtg
ccctacagcgcattcgatcaggatgacgaagaggaatcgaccgttaacgccatcgaaacg
aacgaagcgatgaaccgctattcgctgacgcaggagtcggaagcgcgcaggttcgaaatc
gcggagttcgacggcagattgagagaatacggcattacgttcggcgagctgccggacatt
tcgccgaagcattccgattcgaggcagctgcttatcggaatcagtcgccgattggcgaac
gatcccgagctgtacgatcaattggagacgaagcagaagctgccgatcaaggagctctgc
gaaatcatcggcgtctcccgcaagaccatcgagcgcaaccgcaagtatattatcgcgctg
acgattttacataatggcgattttccgtatttgcagcaatacataaagccccaggagccg
cctgtacataaggagctgcccgcagtggaaggagtgagagcatga
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