Paenibacillus lycopersici: GXP70_24200
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Entry
GXP70_24200 CDS
T07013
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXP70_24200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_24200
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GXP70_24200
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GXP70_24200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QHT62778
UniProt:
A0A6C0G037
LinkDB
All DBs
Position
complement(5523435..5524562)
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AA seq
375 aa
AA seq
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MLKIGSHVSFSDKGLLTATNEAVSYGSSTFMIYTGAPQNTRRKPMEDLYIPEGRAAMGEA
GIDEIVVHAPYIINLGSYKDDTYELAVRFLQEEIRRTDAIGVRNIVLHPGAFTDKDAEYG
IARIAEGLNEVLNGTKETNVNIALETMAGKGTEIGRSFEELASIIDKVGANDRLTVCMDT
CHMHDAGYDIVNDPDGVLTAFDKTVGLDRVAVVHINDSKNPRGAGKDRHAPIGAGWIGHD
AIRNFVHHEALKGRPFILETPWIGQEDKTQRPMYEAEIALLRGDASNRFGSRFLEDVERL
HHFFGKQEIDHRAFVLNVWDVLKNDAKAKKADPREPMDRLFDLVAEHRVLPELSEEAVNQ
RITAWFAGKTLLVNA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatcggttcccatgtttcattttccgataaagggctgcttaccgctacgaac
gaagccgtgtcttacggctccagcacgttcatgatctataccggcgcgccgcagaacacg
cgccgcaagccgatggaagacctgtatattcccgaaggcagggccgcaatgggcgaagcg
ggcatcgacgaaatcgtcgtgcatgcgccatatatcatcaacctcggttcctataaagac
gacacgtacgagctggccgtccggttcctgcaggaggaaatccgccgcacggacgcgatc
ggcgtccgcaacatcgtgctgcatcccggcgcgttcacggacaaagacgcggagtacggc
attgcccgcatcgccgaaggactgaatgaagtactgaacggcacgaaagaaacgaacgtc
aacatcgcgctcgaaacgatggcgggcaaaggaacggagatcggccgcagcttcgaggaa
ctcgcctccatcatcgataaggtcggcgccaacgatcgcctgaccgtctgcatggatacg
tgccacatgcacgatgccggctatgacatcgtcaacgacccggacggcgtgctgaccgcg
ttcgacaagacggtcggcctggatcgcgtcgcggtcgtgcatatcaacgacagcaagaac
ccgcgcggcgcgggcaaggaccgccatgccccgatcggcgcgggctggatcggccacgac
gccatccgcaatttcgtccatcacgaggcgctcaaaggccgtccgttcatcctcgagacg
ccgtggatcggccaggaggacaagacgcagcgcccgatgtacgaggcggaaatcgccttg
ctgcgcggcgatgcttccaatcgcttcggcagccggttcctggaggatgtcgagcgtctg
caccatttcttcggcaagcaggaaatcgatcaccgcgcgttcgtgctgaacgtatgggac
gtgctgaagaacgacgcgaaggcgaagaaagccgatccgcgcgagccgatggaccgcctg
ttcgatctcgtggccgagcaccgcgtgcttcccgagctgtcggaagaagcggtcaaccag
cgcatcaccgcctggttcgcgggcaagacgctgctcgtgaacgcctaa
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