Paenibacillus lycopersici: GXP70_24365
Help
Entry
GXP70_24365 CDS
T07013
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03420
Nucleotide excision repair
plyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXP70_24365
03430 Mismatch repair
GXP70_24365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_24365
Enzymes [BR:
plyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP70_24365
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXP70_24365
MMR (mismatch excision repair)
Other MMR factors
GXP70_24365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
nSTAND3
Pox_I6
DUF6495
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHT62804
UniProt:
A0A6C0G5F3
LinkDB
All DBs
Position
complement(5554535..5557009)
Genome browser
AA seq
824 aa
AA seq
DB search
MAGSGNDFFARKHAELGVALNEVQKKAVLQTEGALLLLASPGSGKTTTVIMRIGYLIEVK
GVHPSRIKAVTFSRASAQDMKDRYTRFFPDHPDGGVQFSTIHSFAFEVMREHLRRSRLTF
QIIEGEVEQREDEELPLHKKLILRDLYRKLKGENLTEEQMEELTTYISFVKNKLLPEREW
ESVKCDVPEAAQVAKAYEAFKRSFEGRLLVDYDDMLVLANGALEDDGGLLWKYQNRYDYV
LTDESQDTSLVQHAIIEKLARRHGCLCVVADDDQSIYTWRAAEPQYLLDFRNVFPEAAVL
KMEQNYRSSRNIVDIANRFIKRNEQRYDKNMFTRNPGSRPIYIKQLDDYKGQAKYVAAAV
EGSVAPLPQNGQPMHPEHAAPPTQNGRPAQPGTEALGETAVLYRNNASSIMLMNEFDRRG
IPFYMKDGDNRFFSHWVLEDVLGFMRMAYTDKRPDLLEKIHTKMAGYVSKVQMAALTAID
NGESVFDNLVNHVPLKDYQSKQLLECKELFQAMRSMEPRAAIRLIRFKLGYERAIDRMCE
RLGFRKENLTGILNTLEDIADGLATLEDFANRLKYLEAVMKASKKNKNANAVTFSTLHSA
KGLEFERVFMIDLIDGIIPSNEDMKKTEGEVSPLMEESVRLFYVGMTRAKRELTLLSYAK
RDGEEATESQFVKAVRELQSPRQAAASAPGRRPEAAWNADAPGRRPGAAKPTASASAAAA
DAAAKTKRGAAGRGAAASRSGRTAGASSGVTVTEGRPGEEPSARNPRALKSFDGLKPGDP
LVHAAFGPGAFVSASRDMIEIDFAGGRRKLSAAACIGMGLVSRP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatcgggcaacgattttttcgcgcgcaagcacgcagagcttggcgtcgcttta
aacgaagtacagaagaaagccgtgctgcagacggagggggcgctgctgctgctcgcatcg
ccgggctccggcaagacgacgaccgttatcatgcgcatcggctacctgatcgaggtgaag
ggcgttcacccttcgcggatcaaggcggtgacgttcagcagggcgtcggcgcaggatatg
aaagaccggtacacccggtttttcccggatcatccggacggcggcgtacagttctccacg
atccatagcttcgcgttcgaggtgatgcgggagcatctgcgccggtcgcggctgacgttc
cagatcatcgagggcgaggtggagcagcgggaagacgaggagctgccgctgcataagaag
ctgatcctgcgcgatctctatcgcaagctgaagggcgagaacctgaccgaggagcagatg
gaggagctgacgacgtacatcagcttcgtcaagaacaagctgctgccggagcgggaatgg
gaatcggtgaagtgcgacgttcccgaggcggcgcaggtcgcgaaagcgtacgaagcgttc
aagcgttcgttcgagggcaggctgctggtcgattacgacgatatgctcgtgctggcgaac
ggcgcgctggaggacgacggcgggctgctgtggaaataccagaaccgctacgattatgtc
ctgaccgacgaaagccaggatacgtcgctcgttcagcatgcgatcatcgagaagctggcg
cgcaggcacggctgcctgtgcgtcgtggccgacgacgatcagagcatctatacgtggcgg
gccgcggagccgcagtatttgctcgatttcaggaacgtcttccccgaggcggccgtgctg
aagatggagcagaattaccgttcgtcccgcaacatcgtagacatcgcgaaccgtttcatc
aagcgcaacgagcagcgctacgacaagaacatgttcacccgcaatccgggcagccggccg
atctatatcaagcagctcgacgattacaaggggcaggcgaaatacgtggccgcggcggtc
gaaggttcggtcgctccgctgccgcagaacggccaacccatgcatccggagcatgccgct
ccgcccacgcagaacggccggcccgcgcagccggggacggaagcgcttggcgagacggcc
gtgctgtaccgcaacaatgcgtcgtcgatcatgctgatgaacgaattcgatcggcgcggc
attccgttctacatgaaggacggcgacaaccgcttcttctcccactgggtgctggaggac
gtgctcggcttcatgcgcatggcgtatacggacaagcgccccgatctattggagaagatt
catacgaaaatggccggctacgtctccaaggttcagatggccgccttgaccgcgatcgac
aacggggaatccgtcttcgacaacctggtcaatcacgtgccactgaaagactatcagtcg
aagcagctgctggaatgcaaggagctgttccaggcgatgcggagcatggagccgcgcgcg
gccatccgtctgatccggttcaagctcggctacgagcgggcgatcgaccggatgtgcgag
cggctcggcttccgcaaggagaatctgaccggcatcctgaacacgctcgaggacattgcg
gatggccttgcgacgctggaggatttcgcgaaccggctgaagtacctggaggcggtcatg
aaggcgtccaagaagaacaagaacgcgaacgcggtcacgttctcgacgctgcacagcgcg
aaggggctcgaattcgagcgggtgttcatgatcgatctgatcgacggcatcattccgtcg
aacgaagacatgaagaagacggaaggcgaggtatcgccgctgatggaggagtccgtccgg
ctgttctatgtcggcatgacgcgggcgaagcgcgagctgacgctgctcagctatgcgaag
cgcgacggcgaagaggcgacggagtcgcagttcgtgaaggcggtgcgggagctgcagtcg
ccgcggcaagcggcggcttcggcacccggacgcaggccggaagcggcgtggaacgcggat
gcgccgggccgtcgtcccggcgccgcgaagcccacggcgtctgcgtccgcggcagcggcg
gatgccgcggcgaagacgaaacggggcgctgccggacgcggcgccgccgcgagccgttcc
ggccgcacagcgggcgcgagctccggcgtcaccgtcaccgaaggccggcccggcgaagag
ccgtccgcgcgcaatccgcgcgcgctgaagagcttcgacgggctgaagcccggcgacccg
ctcgtgcatgccgcgttcggcccgggcgcattcgtctcggccagccgcgacatgatcgaa
atcgacttcgccggcggcagacgcaagctgtccgccgccgcctgcatcggcatgggtctc
gtgtcgcgcccgtag
DBGET
integrated database retrieval system
