Paenibacillus lycopersici: GXP70_25735
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Entry
GXP70_25735 CDS
T07013
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GXP70_25735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_25735
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GXP70_25735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QHT63029
UniProt:
A0A6C0G5Q2
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All DBs
Position
5864506..5865429
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AA seq
307 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDIAMKLIHRPCGSNVSYIRKCPTCEVEVDWDNI
VKGYEYEKGRYVLFEKDELEQLSGEATKTITILDFVALEDIDPIYFQKTYYLSPDQAGGN
AYNLLMEAMRQSGRIGIAKVSIRSKSSLAAIRIIDDCLAMETIFYPDEIRPVSQVPGLPD
SVNVNEKELMMARMLIEQLSTPFEPAKYTDDYRARLMDLIQHKIAGEEVSVAPEAQKTNV
LDLMAALQASLEAVKLPPNAPGGLDTNAAGTMPPAPAQPAADGAGSEVVAKVKTPRARKT
KKEETVS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtctggaaaggcgccatcagcttcggcctcgtgcacgtgccggtcaaaatg
ttttccgccaccgaggacaaggacatcgcgatgaagctcattcaccgcccttgcggcagc
aacgtatcgtatatccgcaaatgcccgacctgcgaggtcgaggtcgactgggacaatatc
gtcaaaggctacgaatacgagaagggacgctacgtcctgttcgagaaggacgagctggag
cagctgtccggcgaggcgacgaagacgatcacgattctggacttcgtcgcgctggaggac
atcgacccgatttatttccagaagacgtactatctctcgcccgatcaggccggcggcaac
gcctataatctgctgatggaagcgatgcgccaatccggccgcatcggcatcgccaaagta
tcgatccgttccaagagctcgctcgcggccatccgcatcatcgacgactgcctggcgatg
gagacgattttctatcccgacgaaatccggccggtcagccaggtgccggggctgccggac
agcgtcaacgtgaacgagaaggagctcatgatggcgcgcatgctgatcgagcagctgtcc
acgccgttcgagcccgccaagtatacggacgattaccgcgcgcggctgatggatctgatc
cagcacaaaatcgccggcgaggaggtttcggtggcgccggaagcgcagaagacgaacgtg
ctcgatctgatggccgcgctgcaggccagcctcgaggcggtcaagctgccgccgaacgcg
cccggcgggctcgatacgaacgcggccggcacgatgccgccggcgccggcccagcctgcc
gccgacggcgcgggcagcgaagtcgtcgccaaagtgaaaacgccgcgcgcccgcaaaacg
aagaaggaagaaacggtgtcctaa
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