KEGG   Paenibacillus lycopersici: GXP70_26870
Entry
GXP70_26870       CDS       T07013                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
plyc  Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:plyc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plyc02048]
    GXP70_26870 (cas8c)
Prokaryotic defense system [BR:plyc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    GXP70_26870 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 KH_YLL032C_5th
Other DBs
NCBI-ProteinID: QHT63227
UniProt: A0A6C0G304
LinkDB
Position
complement(6144327..6146213)
AA seq 628 aa
MSWLLNLYETYESNSSHIGKIEKKHNDQEYTLLPVSHTTQNAHIEVLITEEGEFHSARVV
DKDDMSTLIPCTEDAANRAGSKIAPYPLHDKLSYVAGDYTAYGGEVKKEELFPYYINQLR
EWADSPFAVAKVKSIYGYLSKGSLIRDLVMARVLFADADRRIFDKWDAVAEALHGAKPPL
YALVPGDPGSAFVRFNVYSADKLLTDVWKDKEMYDSFIQFYSGKLGDEELCYVSGKRLPS
TDKHANKIRNAADKAKLISANDNSGFTFRGRFRTSLEAASISYEVSQKAHNALKWLINRQ
GMQMDQRVFLVWGNEEPDIPGVTEDMFSISPITVAVKEKKVSTNREFAGEVAKAFAGYRN
RLHSPSKANVNILILDSATTGRMAVLYYRNMDKEVYLNRLVKWHSTCAWLHRYRKNEDGN
YTQFYGAPATKDIAYAAYGPRAGDKIVKGLMERMLPCIIDERKIPPDIVAGAVQRASNPV
AMERWEWEKTLSITCALINRRRGLELSLDAGNNDRDYLFGRLLAVADVLERRALGSEERE
SNALRYMSAYAKHPARTWRTIQDSLRPYQARLGPKGIYLSKLIDEIGSRMPIEAFTNKPL
SDLYLLGFYSQRHELYQSKIHNADDASN
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgagttggctgctgaacttatacgaaacctatgagtcgaattccagccatattggcaag
atcgagaagaaacataacgatcaagagtacacgttgctgccagtctcccatacgacgcaa
aatgcgcacattgaagtgctgatcaccgaagagggcgagtttcactcggcacgtgtcgtt
gacaaggacgatatgagcacattaatcccttgcaccgaagatgccgcgaaccgcgccggt
tccaaaatcgccccttatccgctccatgataaattgagttatgtggcgggagattacacc
gcctatggaggggaagtgaaaaaggaagaactattcccctattacatcaatcaattgagg
gaatgggctgattcaccttttgcggtggcgaaagtaaagagcatttacgggtatttgagc
aagggtagcctcattcgggatctggtgatggcgcgagtgttattcgcggatgctgaccgc
cgtatcttcgataaatgggatgcagtggccgaggcattgcacggggcaaagccgccctta
tacgcgcttgttcccggcgatcctggaagcgctttcgtaagattcaatgtctattctgcc
gacaagctgctaacagatgtctggaaggataaagagatgtatgattctttcatccaattt
tatagcggtaaactgggcgacgaagagctttgctatgtctccgggaagcgactcccgtct
acggacaagcatgcgaacaaaatcagaaatgcggcggataaggcgaagttgatctcggct
aatgacaacagcggctttactttccgggggcgattccggacaagcctggaagcggcatcg
atcagctatgaagtatctcagaaggctcacaatgcattgaagtggctcattaatcgccag
ggtatgcaaatggatcagcgtgtctttctggtatggggtaacgaggaaccggatattcct
ggggttaccgaagatatgttttcgatttcgcctatcacagtggctgttaaagagaagaag
gtgtccaccaatcgggagttcgccggcgaggtggcaaaagcgtttgccgggtacaggaat
cggttgcattccccgtcgaaggcaaacgtgaacatactaatcctggattctgcgacaact
ggacgtatggctgttctatattatcggaacatggataaggaagtttatctcaatcgcctc
gtgaagtggcattctacttgtgcttggctgcatcgatatcgtaagaatgaggatggaaac
tatacgcaattttatggtgcgcctgcaacgaaggatatcgcctatgccgcatacggaccc
cgagccggcgacaagatcgtcaaaggtttgatggagcgtatgctcccatgtattatcgat
gaacgcaagattcctccggatattgtagctggcgccgtgcagcgagcatccaatccggta
gcgatggaacgttgggaatgggagaagacgctcagcattacttgcgctttaattaacaga
aggaggggactcgaattgtcactagatgcaggtaacaacgaccgcgattatctatttggc
cgattgttagccgtcgccgatgtgttggaaagaagggcgcttggcagtgaagagcgggaa
agtaacgcgctccgctacatgagtgcgtatgccaagcatccggccagaacctggcgtacg
atccaagatagcttgcggccataccaagctagactcgggccgaaagggatatacctatcg
aaattgattgatgaaatcggttcgcgaatgccgattgaagcttttactaataagccctta
tcggatttgtacttgcttggattctacagtcagcggcatgaactttatcagtccaaaatt
cacaacgcggacgacgcgtcgaattaa

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