Paenibacillus lycopersici: GXP70_27000
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Entry
GXP70_27000 CDS
T07013
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plyc03016
]
GXP70_27000
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GXP70_27000
Transfer RNA biogenesis [BR:
plyc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GXP70_27000
Prokaryotic type
GXP70_27000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QHT63249
UniProt:
A0A6C0G5Y8
LinkDB
All DBs
Position
complement(6180717..6181496)
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AA seq
259 aa
AA seq
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MTELLFLGTSAGVSTANRHHCSMAIKKNGRLYVIDCGCPVSMLLKQMGEDPKSIEAVFLT
HWHPDHAGGLPMLIQDLQLTYKPDNLPIYGPASTIRKVGELQSMFIIPPDVYPFQLEAHE
YDEEFVFERDGLRIEFFKTMHLNNENWRKIDDRHGNAVAPVAYGMVLHIDGKKIVVSGDV
LSSADIVRVLPDADLVIHEFGHIHPEKLNAFVKEQGIANMVITHIHHEWDLRTDELTQIV
SEGHSGDVKVAHDGMRLAI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacagaactattattcctgggaacgagcgccggcgtttcgacggcgaaccgccatcac
tgcagcatggcgatcaagaagaacggacgtttgtacgtgatcgactgcggctgcccggtc
agcatgctcctgaagcaaatgggcgaagatcccaagagcatcgaggccgtcttcctgacg
cactggcatcccgaccacgccggcggcctgccgatgctgatccaggatctgcagctgacg
tataagccggataatttgccgatctacggtcccgcaagcacgattcgcaaagtcggcgaa
ttgcagtcgatgttcatcattccgccggacgtctatccgttccagctggaagcgcatgaa
tacgacgaggagttcgtgttcgagcgggacggcttgcggatcgaattcttcaagacgatg
catctgaataacgagaactggcgcaaaatcgacgaccgtcacggcaatgcggtcgctccc
gtcgcatacgggatggtgctgcatatcgacggcaagaagatcgtcgtgagcggcgacgtg
ctgtcttccgccgacatcgtccgcgtgctgccggatgcggatctggtcattcacgagttc
ggccatatccatccggagaagctgaacgcgttcgtgaaggagcagggcatcgccaacatg
gtgatcacccacattcatcacgagtgggatttgcggacggacgaattgacgcagatcgtc
tcggagggccattccggcgacgtgaaggtcgcgcatgacggcatgcggttagccatctaa
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