Paenibacillus lycopersici: GXP70_27065
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Entry
GXP70_27065 CDS
T07013
Name
(GenBank) family 78 glycoside hydrolase catalytic domain
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc00946
Degradation of flavonoids
plyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
GXP70_27065
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
GXP70_27065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
QHT63261
UniProt:
A0A6C0G5B5
LinkDB
All DBs
Position
complement(6201639..6204371)
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AA seq
910 aa
AA seq
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MGFHAESLTCEYRTDVLGLDFKAPRFGWKLRSDRRGTLQTSYRLQVAGADGDYSAPLWDS
GRVASDASIQVAYAGPELRSRTRYHARVKAWDSFGRESAWSESVWWETAFFTPDEWRAKW
ITPAASAIDPQATPAFMLAKRFEVKPDIVSARVYATAAGVYELYVNGEKVGDELLAPGWT
SYRKRQQYQTYDVTNLLTAGGPNGIGAMLANGWFKGRLGWETTFNLYGDRRALLLQLHIA
YADGTEEIVCSDESWKAAEGAIRLSELYDGETCDANLEQPGWSTPAFDDSAWSTAESIAL
PVTHLTAQEHHPIRVIETIKPRELIRTPNGEVVLDMGQNMVGRIRMTLDVPAGTTVTLKH
AEVLDKDGNFYVGNLRSAKQAIVYTAAGVPGETYAPTFTFMGFRYLSVAGLPEEQAEGLM
DAIVGEVIHTDMAPTGEFDCSSDMVNQLQRNIQWGQRGNFVDVPTDCPQRDERLGWTGDA
QVFVRTAAFNYDVAAFFTKWLRDLKADQNPNGGVPFVIPNALFETDPPTPQEKIPSSSAW
GDAAVIVPWTMYLCYGDVRLLSEQYESMCAWVSFIRNEGENEYLWNTGFHFGDWLGLDAK
ENSYVGATPRDLIATAFFAYSTRLVRETAVVLGKAADVRKYSELHDRIKAEFSREFVTPS
GRLAAPTQTAHVLALMFDLVEGDVKKRIARELNELVVQNDYHLTTGFVGTPYLCFALSDN
GYHATAVKLLMQETYPSWLYSVSKGATTIWEHWDGIKPDGSFWSDAMNSYNHYAYGAIGE
WMYRYVAGLDMDETEAAYKKIRIRPRFADGSLTHARAALESPYGRIESGWSQEADEITVR
FTVPANATAELVLDDVALAELKEDGLAADLADGVTAAEEADGSVRLTLGSGSYAFRYPAK
QEAEQEPVTA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcatgcggaatcgcttacatgcgagtatcgtacggatgtgctgggccttgac
ttcaaggcgccgcgtttcggttggaagctgcggtcggatcgcagaggtacgcttcaaacg
tcttatcggctgcaggttgcgggagcggacggcgactattcggcgccgttatgggattcc
ggccgcgtagcgtcggatgcgtccattcaggttgcatacgccgggcccgagctgagatcg
cgcacgcgctaccatgcacgggtgaaggcatgggacagcttcggccgcgagtcggcgtgg
agcgaatccgtctggtgggagacggcgttcttcacgccggacgaatggcgggcgaaatgg
attacgccggccgcatcggccatcgatccgcaggcgacgccggcgttcatgctggccaag
cgtttcgaggttaagcccgatatcgtctccgcgcgcgtctatgcgacggctgccggcgta
tacgagctgtacgtgaacggcgagaaggtcggcgacgagctgctcgcgcccggctggacg
agttaccgcaaacggcagcagtatcaaacgtacgacgtgacgaacctgctgacagcgggc
ggtccgaacggaatcggcgccatgctcgccaacggctggttcaaaggccggctgggctgg
gagacgaccttcaatctgtacggcgatcgccgggcactgctgcttcagctgcatatcgcc
tatgccgacggcacggaagaaatcgtatgcagcgacgagtcgtggaaagcggccgaaggc
gcgatccgcctgtcggaattgtatgacggcgagacctgcgacgcgaatctggaacagccc
ggctggagcacgccggcgttcgacgattcggcgtggagcactgcggagagcatcgcactt
ccggtgacccatctgaccgcccaggagcatcatccgatccgcgtcatcgagacgatcaag
ccgcgggagctgatccgcacgccgaacggcgaagtcgtgctcgacatggggcagaacatg
gtcggccgcatccggatgacgctggacgttcccgcaggaacgacggttacgctgaagcac
gcggaagtactcgataaggacggcaacttctatgtcggcaacctgcgttccgccaagcag
gcgatcgtgtacaccgcggcgggcgtgcccggcgagacgtatgcgccgacattcacgttc
atgggcttccgctatctgagcgtcgccggcctgccggaagagcaagcggaggggctgatg
gacgccattgtaggcgaagtcatccataccgacatggcgccgacgggagagttcgactgc
tcgagcgacatggtcaatcagctgcagcgcaatattcagtggggccagcgggggaatttc
gtcgacgtgccgacggactgcccgcagcgcgacgagcggctcggctggacgggcgacgcg
caggtgttcgtccggacggccgcgttcaactacgacgtggcggcgttcttcacgaaatgg
cttcgcgatctgaaggccgatcagaatccgaacggcggcgtgccgttcgtcattccgaat
gcgctgttcgagacggacccgccgacgccgcaggagaaaattccgtcttcatccgcgtgg
ggcgacgccgccgttatcgtgccgtggacgatgtatctctgctacggcgacgtccggctg
ctgtcggagcagtacgagagcatgtgcgcctgggtatcgttcattcggaacgagggcgag
aacgaatatttgtggaacaccggcttccatttcggcgactggctgggcctcgacgccaag
gagaacagttacgtcggcgcgacgccccgcgatctgatcgcaacggctttcttcgcgtac
tcgacccggctcgtccgcgagacggcggtcgtgctcggcaaggcggcggacgtgcgcaaa
tacagcgagctgcacgaccggatcaaggcggagttcagccgcgaattcgtaacgccgagc
ggtcgtctggccgcgccgacgcagaccgcgcatgtgcttgcgctcatgttcgatctcgtc
gagggcgacgtgaagaagcggatcgcgcgcgagctgaacgagctcgtggtacagaacgat
taccacctgacgaccggcttcgtcggcacgccgtacctgtgcttcgctttgtcggataac
ggttatcacgcgacggccgtgaagctgctcatgcaggaaacgtacccgtcctggctctat
tccgtgtccaaaggcgcgacgacgatctgggagcattgggacggcatcaagccggacggc
tcgttctggagcgatgccatgaactcgtacaaccactatgcgtacggcgcgatcggcgag
tggatgtaccgttacgtagccggcctcgacatggacgagaccgaagcggcgtacaagaaa
atccgtattcgtccgcgcttcgcggacggctcgttgacgcatgcgcgcgcggcgctggag
tcgccgtacgggcggatcgaatcgggctggtcgcaagaggcggatgaaataaccgtgcgc
ttcacggtgccggcgaacgcgacggcggagctcgtgctggacgacgtcgcgctggcggag
ctgaaggaagacggactcgcggccgatcttgcggacggcgtaacggcggccgaagaagcg
gacggcagcgtaagactgacgctcggttcgggaagctatgccttccgctatccggcgaag
caggaggctgaacaggagccggttacggcgtaa
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