Paenibacillus lycopersici: GXP70_27530
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Entry
GXP70_27530 CDS
T07013
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plyc03016
]
GXP70_27530 (truA)
Enzymes [BR:
plyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GXP70_27530 (truA)
Transfer RNA biogenesis [BR:
plyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GXP70_27530 (truA)
Prokaryotic type
GXP70_27530 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SAP30_Sin3_bdg
Motif
Other DBs
NCBI-ProteinID:
QHT63333
UniProt:
A0A6C0G4Y2
LinkDB
All DBs
Position
complement(6302077..6302817)
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AA seq
246 aa
AA seq
DB search
MRNIRMAISYDGTTYYGFQTQPIGNTVQDVLEDAIRGLTGEQVDITASGRTDAGVHARRQ
VINFETSSPIPVDRWALALNSRLPDDIIVLQADEADPSFHASYYAKRKTYRYGIDTSKFG
DVFDRKYRLHYPMPLRLKEMKEALAHVVGKHDFTSFASRRSTKPSHVRTILDARIEEREG
KLDIFLTGNGFLYNMVRIIVGTLLWVGEGKLSPDDFKRILEARDRTAAGPTAMAHGLMLW
DVEYED
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatatccggatggcgatcagctatgacggaacgacgtattatggatttcagacg
cagccgatcgggaacaccgtgcaggatgtgctggaagacgcgatacgggggctgacgggc
gaacaggtcgacattacggcttccggccgtacggatgccggcgttcatgctcgaaggcag
gtcatcaatttcgaaacctcctctcccataccggttgaccggtgggcgctcgcgctcaat
tccagactgccggacgacattatcgtcctgcaggcggatgaagcggacccatcgtttcat
gcgtcgtattatgccaaacgcaaaacgtatcggtacggtatcgacaccagcaagttcggc
gacgtcttcgaccggaagtaccgcttgcattatccgatgccgctgcggctgaaggaaatg
aaagaagcgcttgcccacgtcgtggggaagcatgatttcacgtcctttgcatcgcggcgg
tcgaccaaaccctcgcatgtgcgaaccatcctggatgcgcgcatcgaggaaagggaaggc
aagctggatatattcctgacgggcaacgggtttctgtataacatggtccgaatcatcgta
ggcacgttgttgtgggtgggggaaggcaagctgagcccggatgatttcaaacggattctg
gaagcgcgggaccgaaccgcggcggggccgaccgcaatggcgcatggtttaatgctatgg
gatgtggagtatgaggattaa
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