Paenibacillus lycopersici: GXP70_27880
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Entry
GXP70_27880 CDS
T07013
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03420
Nucleotide excision repair
plyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXP70_27880 (pcrA)
03430 Mismatch repair
GXP70_27880 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_27880 (pcrA)
Enzymes [BR:
plyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP70_27880 (pcrA)
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXP70_27880 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GXP70_27880 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF2067
AAA_11
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QHT63395
UniProt:
A0A6C0G799
LinkDB
All DBs
Position
complement(6362081..6364423)
Genome browser
AA seq
780 aa
AA seq
DB search
MLNEFSIDQAVSKLNPPQRAAVQATEGPLLIMAGAGSGKTRVLTHRIAYLMEKRRVAPWS
ILAITFTNKAAREMQTRVGALVGPSAQDIWVSTFHSMCVRILRRDIGRIGFTNSFSILDS
ADQLSVIRNCMKELNIDTKKFEPKSVQAAIGGAKNELVTPEQFELKIGDYFEGIAAKVYA
MYQKKLKSNNSLDFDDLIMKTIQLFKDEPDVLAFYQNKFRYIHVDEYQDTNRAQYMLCNM
LADKHHNICVVGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTANILNAANA
VIKLNSSRKDKKLWTDQGEGEAILVYQADTEHDEGYFVTGQIRQQVNKGRKFADHAILYR
TNAQSRVIEETLIKSDIPYQIVGGVKFYDRKEIKDLLAYLRLISNPDDDVCFQRIVNVPK
RGIGDTTVTKLLEEAGVRGVSVFALLEQLDWLDVTGRARTALREFQEMIHNLTRMVDYLS
VTELTEKVLEMSGYREELQRENTLESKARLENIDEFLSVTQDFEKRNEDKSLVSFLTDLA
LIADIDSMDEDEPEGGVKDAVVLMTMHSAKGLEFPIVFIIGMEEGVFPHSRALNDNDELE
EERRLAYVGITRAEKQLFLTCARMRTLFGRTNANMPSRFLREVPDELKSDASPAGRSRSI
GGGAGGGFGGGRTGSPTGNGFGYRGGAAAPQRPGAPAANGGSGVRVVDPSRPVLPGRTAA
AGGAAGVNFTVGDKVSHGKWGIGTVVDVRGTGDKQEIQVAFAAPTGIRKLLAAHAPIEKV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatgaatttagcatcgatcaagctgtcagcaaattgaacccgccgcagcgcgca
gccgttcaagcgacagaagggccgctgctcattatggcgggagcgggaagcggcaagacg
cgcgtgttaacgcaccgcattgcgtatttgatggagaagagacgcgtagcgccgtggagc
atcctggcgattacctttacgaataaagcggcgagagaaatgcagacgcgggtaggcgcc
cttgtcggtccgtccgcgcaagatatttgggtatccacgttccactcgatgtgcgtgcgc
attttgcgccgggacatcggccggatcggctttacgaacagcttctcgatcctggattcc
gccgaccaattgtcggtcatccgcaattgcatgaaggaattgaacatcgacacgaagaaa
ttcgaaccgaagagcgtgcaggcggcgattggcggcgcaaagaacgagctggtcacgccc
gagcagttcgagctgaagatcggggattatttcgaaggcatcgcggccaaagtgtacgcg
atgtaccagaagaagctgaagagcaacaactcgctcgatttcgacgacctcatcatgaag
acgatccagctgttcaaggacgagccggacgtgctggccttctatcagaataaattccgc
tatatccacgtcgacgagtatcaagatacgaaccgcgcgcagtacatgctgtgcaacatg
cttgccgacaagcaccacaacatttgcgtcgtaggcgacagcgaccagtcgatttaccgt
tggcggggcgcggacattacgaatattttgaacttcgaggaagattatccggaagcgaag
acgatcctgctggaacagaattaccgctcgacggcgaatatcctgaacgcggcgaacgcc
gtcatcaagctgaacagctcccgcaaggacaagaagctgtggaccgaccagggcgaaggc
gaagccatcctggtctatcaagccgacacggaacatgacgaaggctatttcgtcacggga
caaattcgccagcaagtgaataaagggcgcaaatttgccgatcatgccatattgtaccgc
acgaacgcccaatcgcgggtaatcgaggaaacgctcatcaaatccgacattccgtaccag
atcgtcggcggcgtcaagttctacgaccgcaaagagatcaaggatctgctggcctacctg
cggctgatttccaatccggacgacgacgtctgcttccaacggatcgtcaacgtgccgaag
cggggcatcggcgacacgacggtaacgaagctgctggaggaagcgggcgttcgcggcgtg
tccgtcttcgcgctgctggagcagctggattggctggacgtgacgggacgcgcccgcacg
gcgctccgcgagttccaggagatgattcataacctgacgcgcatggtcgattacttgtcc
gtgacggaattgacggagaaggtgctggagatgagcggctaccgcgaggaattgcagcgc
gagaatacgctggaatcgaaggcgcgcctcgagaatatcgacgagttcctctccgttacc
caagacttcgagaagcgcaacgaagataagtcgctcgtatcgttcctgacggatctcgcg
ctgatcgccgacatcgactccatggacgaagacgagccggaaggcggcgtgaaggacgcg
gtcgtgctgatgaccatgcacagcgccaaaggcctggagttcccgatcgtcttcattatc
ggcatggaggaaggcgtcttcccgcacagccgtgcgctgaacgacaacgacgagctggag
gaagaacgccgtctcgcgtacgtgggcattacccgcgccgagaaacagctgtttctcact
tgcgcgcggatgcgtacgctctttgggcggacgaatgccaatatgccgtcgcggtttttg
cgcgaggtgccggatgagctcaagtccgatgcttcgccggccggtcgaagccggtcgata
ggcggaggcgccggcggcggcttcggaggcgggcgtacaggcagcccgaccggcaacgga
ttcggttaccgcggcggagccgcagcgccgcagcgtccgggagccccggcagcgaacggc
ggcagcggcgtgcgcgtcgtggatccgtcgcgtcccgttcttccgggcaggaccgcggct
gcgggcggcgcggccggcgtgaacttcaccgtgggcgacaaggtttcccatggcaagtgg
gggatcggcacggtcgtcgacgttcgcggaacgggcgacaagcaggagatccaggtcgca
ttcgcggcgccgacgggcatcaggaagctgcttgccgcgcatgctccgattgagaaggta
tag
DBGET
integrated database retrieval system
