KEGG   Pseudoalteromonas luteoviolacea: S4054249_00990
Entry
S4054249_00990    CDS       T04577                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
plz  Pseudoalteromonas luteoviolacea
Pathway
plz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:plz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    S4054249_00990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plz03021]
    S4054249_00990
   03400 DNA repair and recombination proteins [BR:plz03400]
    S4054249_00990
Enzymes [BR:plz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     S4054249_00990
Transcription machinery [BR:plz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     S4054249_00990
DNA repair and recombination proteins [BR:plz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      S4054249_00990
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: AOT06547
UniProt: A0A0C1MLT9
LinkDB
Position
1:235769..236755
AA seq 328 aa
MQGSVTEFLKPRLVDIDAINSTRSKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLTKSGVGPVTAADIQHDGD
VTIANPEHVICHLTADNSDISMRIRVERGRGYVPASSRLSSDDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLEAFVDLRDVSEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcagggttctgtaaccgaattcctaaaaccaagattagtcgatatcgacgctatcaac
tcaacccgttctaaagtagttttagagcctctagagcgtggctttggtcacactttaggt
aatgctttacgtcgtattcttctttcgtctatgccgggttgtgcagtgacagaagtagag
atcgacggtgtattgcacgagtacagcgcgaaagaaggcgtacaagaagacatcattgaa
attctgttaaaccttaaaggtctggcagttactttagaaggtaaagatgaagttttcctt
accctgactaagtctggtgtaggccctgtgactgcggctgacatccagcacgacggcgat
gtaacaattgctaatcctgagcacgtgatttgtcacttaactgctgacaatagcgatatc
agtatgcgtatccgtgttgagcgcggtcgtggttatgttccggcgtcaagtcgtttatcc
tctgatgacgatgagcgtccaattggtcgtctgttgctagatgcatcattcagtccagtt
gagcgtattgcgtactcggttgaatcagcccgtgttgagcagcgtactgacttagacaaa
ttgatcatcgatatggaaactaatggcacactagatcctgaagaagcgatccgtcgtgca
tctacaatcctagctgaacagctagaagcgtttgtagatttgcgtgatgtttctgagcca
gaagaaaaagaagagaagccggagtttgatccgattctacttcgtcctgttgatgattta
gagctaacagtacgttctgcaaactgtctgaaagccgagcaaattcaatatattggtgat
ctggtacaacgtactgaggttgagcttcttaagacgccaaaccttggtaagaaatctcta
acagagattaaagacgtgttagcttctcgtggtctttctctaggcatgcgcctagaaaac
tggccgccagcaagtctagctgaataa

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