Pseudoalteromonas luteoviolacea: S4054249_00990
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Entry
S4054249_00990 CDS
T04577
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S4054249_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plz03021
]
S4054249_00990
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_00990
Enzymes [BR:
plz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S4054249_00990
Transcription machinery [BR:
plz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S4054249_00990
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S4054249_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AOT06547
UniProt:
A0A0C1MLT9
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All DBs
Position
1:235769..236755
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AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIDAINSTRSKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLTKSGVGPVTAADIQHDGD
VTIANPEHVICHLTADNSDISMRIRVERGRGYVPASSRLSSDDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLEAFVDLRDVSEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattcctaaaaccaagattagtcgatatcgacgctatcaac
tcaacccgttctaaagtagttttagagcctctagagcgtggctttggtcacactttaggt
aatgctttacgtcgtattcttctttcgtctatgccgggttgtgcagtgacagaagtagag
atcgacggtgtattgcacgagtacagcgcgaaagaaggcgtacaagaagacatcattgaa
attctgttaaaccttaaaggtctggcagttactttagaaggtaaagatgaagttttcctt
accctgactaagtctggtgtaggccctgtgactgcggctgacatccagcacgacggcgat
gtaacaattgctaatcctgagcacgtgatttgtcacttaactgctgacaatagcgatatc
agtatgcgtatccgtgttgagcgcggtcgtggttatgttccggcgtcaagtcgtttatcc
tctgatgacgatgagcgtccaattggtcgtctgttgctagatgcatcattcagtccagtt
gagcgtattgcgtactcggttgaatcagcccgtgttgagcagcgtactgacttagacaaa
ttgatcatcgatatggaaactaatggcacactagatcctgaagaagcgatccgtcgtgca
tctacaatcctagctgaacagctagaagcgtttgtagatttgcgtgatgtttctgagcca
gaagaaaaagaagagaagccggagtttgatccgattctacttcgtcctgttgatgattta
gagctaacagtacgttctgcaaactgtctgaaagccgagcaaattcaatatattggtgat
ctggtacaacgtactgaggttgagcttcttaagacgccaaaccttggtaagaaatctcta
acagagattaaagacgtgttagcttctcgtggtctttctctaggcatgcgcctagaaaac
tggccgccagcaagtctagctgaataa
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