Pseudoalteromonas luteoviolacea: S4054249_01135
Help
Entry
S4054249_01135 CDS
T04577
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz03420
Nucleotide excision repair
plz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S4054249_01135 (uvrD)
03430 Mismatch repair
S4054249_01135 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_01135 (uvrD)
Enzymes [BR:
plz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S4054249_01135 (uvrD)
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S4054249_01135 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
S4054249_01135 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
SAP18
ChrB_N
Motif
Other DBs
NCBI-ProteinID:
AOT06571
LinkDB
All DBs
Position
1:complement(275865..278030)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSELLDGLNDKQREAVAAPLSNMLILAGAGSGKTRVLVHRIAWLMQVEHASPYSIFAV
TFTNKAAKEMRTRVEETLQSPVGGMWIGTFHGLSHRILRAHHREANLPESFQILDSDDQQ
RMIRRLLKAMNIDEKKWPAKQLSWYISARKDEGLRPKDIQAYDASEQLMLNVYTAYQEAC
DRAGLVDFAEILLRCYELLQQQPTLLRHYQQRFRHMLVDEFQDTNSIQYQWLRLLAGGDN
NIMIVGDDDQSIYGWRGAKIENIKRFLKDFDADTIRLEQNYRSTGTILKASNALIQNNSE
RMGKSLWTDGTQGEPISIYAAFNELDEARFTIGKIKSWLQDGNALTDCAILYRNNAQSRV
LEEALLQEGLKYRIYGGMRFFERQEIKDALSYLRIISNRNDDAAFERVINTPARGIGDKT
LSHIRDCARNESLPLWYAAKAVIEQKHLAGRAATAVTRFIELIEQLDENLVELELAEQAK
TTIEHSGLLAMYQAEKGEKGRARVENLEELINACGQFELPIEEEFSSPLQGFLAYTSLES
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSHEESGRLEEERRLCYVG
MTRAMQKLYISHAESRRLYGQEKYHSPSRFLRELPEDCTEEIRIKTQVSRPATTNRFSAS
VSHAAFEDSDFNLGQRVLHAKFGAGTVLNYEGVGAQSRIQVNFDDMGTKWLVTAYAKLQA
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgaattacttgacggcttgaatgacaagcaacgtgaagcggttgctgca
ccgctcagcaatatgcttattctggctggcgcaggctctggtaaaacccgagtactcgtg
caccgtattgcttggctaatgcaggtggagcacgcctctccttacagtattttcgctgta
acctttaccaataaagctgccaaagagatgcgtacgcgtgttgaagaaacactgcaaagt
ccagtaggtggtatgtggatcggcaccttccacggcttatcacatcgtattttgcgcgcc
catcacagagaagccaatttacctgaatcctttcaaatcttggactcagatgaccaacaa
cgcatgatcagacgcctgcttaaggcaatgaatatcgacgagaaaaagtggccagctaag
cagcttagctggtatatcagcgctcgaaaagatgaaggtttgcgacccaaagatattcaa
gcctatgatgccagtgagcaacttatgctcaacgtttacaccgcttaccaagaagcgtgt
gatagagctggcctagtagattttgccgaaatactgctgcgttgttacgaactacttcag
caacaacctacgctgctgcgtcattatcaacagcgcttcagacatatgttggtagacgaa
ttccaagataccaacagtatccagtaccaatggttacgcttacttgccggtggcgataac
aacattatgattgtcggtgacgatgatcaaagcatctacggctggcgcggtgctaaaatt
gaaaacatcaaacgcttcttaaaagactttgatgccgataccattcgccttgagcaaaac
taccgctcgacaggcaccattttgaaagcctccaatgccctcattcaaaataactcagaa
cgaatgggtaaaagcctttggacagatggcacacaaggggagccaatctctatttatgcc
gctttcaatgaattagatgaagcgcgttttacaataggcaaaattaaatcttggctacaa
gatggtaatgcgctgacagactgcgccattttatacaggaacaatgcgcaatctcgtgta
ttagaggaagcccttctacaagaaggccttaagtatcgtatttatggcggcatgcgcttc
ttcgaacgccaagagattaaagatgcgctatcttacttacgtattatcagcaaccgtaat
gatgatgctgcttttgagcgcgtgatcaatacgccagcacgcgggattggtgacaaaacc
ctgagtcatattcgtgattgtgcacgaaacgaatccctgccactgtggtatgcagccaaa
gccgtcattgagcaaaaacatttggcaggacgcgcagccaccgctgtcacccgatttatt
gaattaatcgagcagttagatgaaaacctagttgaactcgaacttgcggaacaagccaaa
accacaattgaacactcaggcttattggccatgtatcaagctgaaaaaggtgagaaaggc
cgcgcccgagtagagaacttagaagaattaatcaatgcatgtggccagtttgaactacca
atagaggaagagtttagctcgccattgcaaggcttcttagcctatacctcactcgagtct
ggcgaaggccaagccgatgagcacgaagatgcagtgcaaatgatgacgctgcactcggcc
aaaggcctagagtttccactggtctttatggtgggtgtagaagaaggtatgttcccatca
cagcaaagccatgaagagtctggccgcttagaagaagagcgtcgactgtgctatgtcggc
atgacacgtgccatgcaaaaactctatatcagtcatgcagaaagccgccgtttatatggt
caagaaaagtaccatagcccgtctcgatttttacgtgaactccctgaagattgcaccgaa
gaaatacggattaaaacccaagtttccagacctgcgaccactaatcgcttcagtgcatcg
gttagtcatgcagcatttgaagacagtgattttaacctcgggcaacgagtattacatgca
aagtttggtgccggtaccgtgctcaattatgaaggtgtcggtgcgcaatcgcgcattcaa
gtcaacttcgacgatatgggcaccaagtggcttgtaacggcttatgcaaaactacaagca
ctataa
DBGET
integrated database retrieval system
