Pseudoalteromonas luteoviolacea: S4054249_03970
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Entry
S4054249_03970 CDS
T04577
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plz03000
]
S4054249_03970
Transcription factors [BR:
plz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
S4054249_03970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
Sigma70_r4
HTH_40
HTH_10
HTH_7
Phage_terminase
RexB
Motif
Other DBs
NCBI-ProteinID:
AOT07079
LinkDB
All DBs
Position
1:complement(949627..950343)
Genome browser
AA seq
238 aa
AA seq
DB search
MKAIQASNKEVSLFVLTHNQTDTQDIEFVRFVKILEATCSQIKIDTRLPDITARDQFNLY
LVDISHRECKDLLSAEVSALAAQQNVLLFNAQPNLVNEQTALLARIKGVIYQNTSAENIF
KGIQRVLNGELWFCRTSISQAFDELIQQLPNISRPQPLDVQDTELALLTAREKSVIKLLA
SGAKNDDIADSLNISSHTVKTHIYSAFKKTNSRNRIELANWAQKHIPLNSVPVSLHRH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgattcaagctagcaacaaggaagttagtctatttgttttaactcacaatcaa
accgacacacaagacattgaatttgtgagatttgtaaaaattctcgaggcaacctgcagc
caaattaaaatagatacacgcttgcctgacatcacagcgcgtgatcaattcaatctatat
ttagtcgatataagtcatcgcgaatgcaaagatttacttagtgcagaggtcagtgcatta
gcagctcaacaaaacgtattactatttaatgcgcaacccaacttagtcaatgaacaaacc
gcacttttggcccgaataaaaggcgttatatatcaaaacacttctgctgaaaatattttt
aaagggatccaacgcgtactcaacggcgagttatggttttgccgtacttcaatatcacaa
gcatttgatgaattgatccaacaattgcccaacatatcacgccctcagcctctggatgtt
caggatactgaacttgcattgctcacagcgagagaaaagtctgtcattaaactccttgcc
agtggtgcaaaaaatgacgatattgctgactctttaaatatcagcagccacacagttaaa
actcatatttacagcgctttcaaaaaaaccaactcaagaaatcgtattgagttggctaat
tgggcacaaaagcatattccactcaactccgtgcctgtatcgctgcaccgtcattaa
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