Pseudoalteromonas luteoviolacea: S4054249_05995
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Entry
S4054249_05995 CDS
T04577
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plz03016
]
S4054249_05995
Enzymes [BR:
plz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
S4054249_05995
Transfer RNA biogenesis [BR:
plz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
S4054249_05995
Prokaryotic type
S4054249_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AOT07419
LinkDB
All DBs
Position
1:1380403..1381338
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AA seq
311 aa
AA seq
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MARRSKGRPVDGIVLLHKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAQLGERTTTSDSDGEIVETRPVEITQQQLEQEVASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYSITLDEYDVESQQIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSGVGHYPAEKMITIEALEEKLQQAKADGVEPSTYIDE
LLLPMDTALVDLPTITLTKEQGVAFSHGQTVVVGEVPEGVIKVMAEDTFIGIGERNKHGH
LKAKRALSSAQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgtagtaaaggtcgcccggttgatggcattgtacttttacacaagccacaa
gggatctcatctaacaaagccttgcaacaggctaaaggtatctactttgcacaaaaagcg
ggtcatactggtgcgttagatccacttgcaacaggtatgctaccaatctgttttggtgaa
gcaacaaagtttacgcagttcctattggacactgataaaacttatgttgtgcgtgcacaa
ttgggtgaacgtacaacgacgtctgactcggatggtgaaatcgttgaaacacgccctgtg
gaaattacgcaacagcaattagagcaggaagtggctagctttttaggtgagtctgatcaa
tacccttcgatgtattctgcgcttaaatatcaaggccagcctttatataagtatgcacgt
gaaggcattgaagtaccgcgtaaatgccgcaaaataaatgtgtacagtatcacgcttgat
gagtatgacgttgaaagtcagcaaatccagatgaccgtacacgtttcaaagggcacctat
attcgcactattgtggacgacttaggagagaagctaggttgtggtgcgcatgtgatcatg
ctacatcgcagtggtgttggtcactacccagcagaaaagatgatcaccattgaagcatta
gaagaaaagttacaacaagctaaagcggacggtgttgagccatcaacatacattgacgag
ttactgcttccgatggacaccgctctggtcgacttaccgacgattactttaaccaaagag
caaggtgttgcttttagccatggacaaaccgtggtggtgggtgaggtacctgaaggcgtt
ataaaggtaatggctgaagatacgtttatcggtattggcgaacgtaacaagcatggccac
ctaaaagcaaaaagagctctatctagcgcacaatag
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