Pseudoalteromonas luteoviolacea: S4054249_06005
Help
Entry
S4054249_06005 CDS
T04577
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S4054249_06005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plz03019
]
S4054249_06005
03016 Transfer RNA biogenesis [BR:
plz03016
]
S4054249_06005
Enzymes [BR:
plz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
S4054249_06005
Messenger RNA biogenesis [BR:
plz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
S4054249_06005
Transfer RNA biogenesis [BR:
plz03016
]
Prokaryotic type
tRNA degradation factors
S4054249_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
S1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AOT07421
LinkDB
All DBs
Position
1:1381956..1384085
Genome browser
AA seq
709 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKREAAPGQDFFPLTV
NYQEKMYAAGRIPGGFLKREGRPSDSETLTARLIDRPIRPLFPDGFVNEVQVIATVVSSD
PEIQPDMVALIGTSAALAISGVPFNGPIGAARVGYIDGQYVLNPTVTELAESKLDLVVAG
TENAVLMVESEAEILTEEEMLGAVVYGHDQSQAIIKAIEEFKAEAGKPAWDWAAPEKNVA
LADKVAAIAEEKVGTAYRITDKVARKESLSEAKAEVIEKLTAELAEGEALDEQEVGKLFS
SLEKKIVRGRIIAGEKRIDGREPDMVRALDVMTGVLPRTHGSSIFTRGETQALVTATLGT
ERDAQMMDDLVGTHKHHFMLHYNFPPFCVGETGFIGSPKRREIGHGNLAKRGVQAVMPSL
EEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPVKASVAGIAMGLVKEGEEFVVL
SDILGDEDHLGDMDFKVAGSSAGVTALQMDIKIEGITKEIMQIALSQAKAARMHILSVMD
QAIAAPSQELSEFAPRIYTMNIPPKKIADVIGKGGATIRQLTEETDTTIEIEDDGTVKIA
ATNGNSAKEAIARIEALTAELEVGTIYNGKVNRIVDFGAFVNVLPGKDGLVHISQISKER
VNNVSDHLKVGQEVKVKVLEVDRQGRVRLSIKEALEPSEPAAEQAPKGE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaataattaaagaattccagttaggtcaacatacagtgactttggaaacaggt
gcaatcgcacgtcaggctgacggtgcggttttagcaagcatcggtgatacatcagtacta
gtgactgttgttggtaagcgtgaagcagcgcctggtcaggacttcttcccacttacggtt
aattaccaagaaaaaatgtacgcagctggccgtatccctggtggtttcttaaagcgtgaa
ggtcgtccttcagattcagaaacactgacagcgcgtctaattgaccgtccaattcgtcca
ctattcccagacggtttcgtgaacgaagttcaagttatcgcgacagttgtttcatcagat
ccagaaatccagcctgacatggttgcgttgatcggtacttctgcggcacttgctatttca
ggtgtaccattcaatggtcctatcggcgcagcacgtgttggttacatcgatggtcagtat
gtacttaacccaactgtaactgaactagctgaaagcaagctagacctagtggtagcgggt
actgaaaatgcagtactaatggttgaatcagaagctgaaatcttaactgaagaagagatg
ctaggtgcggttgtatacggtcacgatcagtctcaagctatcatcaaagcaattgaagag
tttaaggctgaagctggcaaaccagcttgggattgggctgctcctgagaaaaacgttgca
ctagcagacaaagtcgctgcaattgcagaagaaaaagtaggcacggcttaccgtattact
gacaaagtagcacgtaaagagtcgctatctgaagcaaaagcagaagtaattgaaaagcta
actgctgagcttgctgaaggcgaagcgctagacgagcaagaagtgggtaaactattcagc
tctctagagaagaaaattgttcgtggtcgtatcattgcaggtgagaaacgtatcgatggt
cgtgaaccagatatggtacgtgcacttgacgtaatgacaggtgtacttccacgtacacac
ggttcatcaatcttcacacgtggtgaaactcaggcattagttactgctactttaggtact
gagcgtgacgcacagatgatggatgatctagttggtactcataagcaccacttcatgctt
cattataacttccctccattctgtgtaggtgaaacgggtttcatcggttctccaaagcgt
cgtgaaatcggccacggtaaccttgcaaagcgtggtgtccaagctgtcatgccaagctta
gaagaattcccatactcagtgcgtgttgtatctgaaatcacagaatcaaatggttcatct
tcgatggcatctgtatgtggtacttctcttgctctgatggacgcaggtgtgcctgttaaa
gcttctgttgctggtatcgcaatgggtctagttaaagaaggcgaagagtttgttgttctt
tcagatatcttaggtgatgaagaccacctaggtgacatggactttaaagtagcaggtagc
agcgctggtgttactgcacttcagatggacatcaagattgaaggtatcacgaaagaaatc
atgcagatcgcacttagccaagctaaagcggcacgtatgcacatccttagcgtgatggac
caagcaattgctgcaccttcacaagaactttctgagttcgctccgcgtatttatacgatg
aacattccaccgaagaagattgcagatgtaatcggtaaaggtggtgcaacaatccgtcag
ctaactgaagaaactgacacaactatcgaaatcgaagatgacggtacagttaagattgct
gcaactaacggtaacagcgcgaaagaagcgattgcacgtattgaagctctgacagctgag
ctagaagttggcactatctacaacggtaaagtaaaccgtatcgttgactttggtgcgttt
gtaaatgtactacctggcaaagatggccttgtacacatttctcaaatcagcaaagagcgt
gtgaataacgtctctgatcaccttaaggtcggtcaagaagtgaaagtaaaagtgctagaa
gtagaccgtcaaggtcgtgtacgtctgagcattaaagaagcacttgagccgtcagagcct
gctgcagagcaagcaccaaaaggtgagtaa
DBGET
integrated database retrieval system
