Pseudoalteromonas luteoviolacea: S4054249_06320
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Entry
S4054249_06320 CDS
T04577
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz00061
Fatty acid biosynthesis
plz00071
Fatty acid degradation
plz01100
Metabolic pathways
plz01212
Fatty acid metabolism
plz02024
Quorum sensing
plz04146
Peroxisome
Module
plz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
S4054249_06320
00071 Fatty acid degradation
S4054249_06320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
S4054249_06320
09145 Cellular community - prokaryotes
02024 Quorum sensing
S4054249_06320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plz01004
]
S4054249_06320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plz04147
]
S4054249_06320
Enzymes [BR:
plz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
S4054249_06320
Lipid biosynthesis proteins [BR:
plz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
S4054249_06320
Exosome [BR:
plz04147
]
Exosomal proteins
Exosomal proteins of breast milk
S4054249_06320
Exosomal proteins of breast cancer cells
S4054249_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-dom_DIP2-like
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AOT07478
LinkDB
All DBs
Position
1:1451321..1452832
Genome browser
AA seq
503 aa
AA seq
DB search
MDGIYSIFKRNVLSMPDKTAVIFKHTCLSYRELDDKVCRLTSYFFQMGLTPGHRVALFAP
NGIEYPIVLMAAAKMGLAIVPLPMSLKGAALEVALKKTPVAAVLAWPTISKVLLEKDLVE
RDKLISFEKSVAGEVTWQQVFLEPCVDTSTDLKNDIDVHAPFILTMTSGSTGAPKPIVLS
QHCKVQRAIEATQNYYGLDKQDKVLVATPLYHSLAQRGVLMPLMLGATTVIMVKFVLQSW
LDAIETHHISFLFAVSAQLESLLSYRGPEFDLSSLRCLVSSSAVLNADSKKALLEKLDCA
FHECYGASEVGVVTDFCVSDLPNKNGSVGKPLPFVDIKICSPERALLDAGQIGEIACKTI
TGFSGYHKMPDATHEAYDAQGYFYTGDLGYIDEQGYLYYVGRKKEVISSGGINIFPQDIE
SVIKRHPDIIECVAFGVEEPQLGEIIKVVYEQRSDESLDKVLRLMCLQELTDYQQPRHLV
RLPEMPRNQMGKVLRNDVKLQNQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatttattcaatcttcaaacgtaacgttttatcgatgccagataaaacggcg
gtgatatttaaacatacgtgcctaagttaccgagagttagacgataaagtttgtcgatta
acatcctatttttttcagatggggctaacacctggtcaccgagttgcgctgtttgcaccc
aatggtattgaatacccgattgtcctgatggcagctgccaaaatggggttagcgattgtg
ccattgccaatgagtttaaagggcgcggcattagaagttgcgttaaagaaaacgcctgtt
gctgctgtattagcttggccaaccattagtaaagtgttacttgagaaagatttggtagaa
cgagataagctgatcagttttgaaaaaagcgttgctggggaggttacctggcagcaagta
tttttagagccctgtgttgatacgtcgacagatttgaaaaacgatattgacgtacatgcg
ccgtttatactgaccatgacatctggctcgactggcgcacctaaaccgattgttctaagt
cagcactgtaaggtgcaaagagccattgaagcaacacaaaattactatggcttagataaa
caagacaaagtattggttgcaacaccactttatcattccttagctcagcgcggcgtgctt
atgcctttaatgttgggcgcaaccacggtgatcatggtgaagtttgtgctgcaaagctgg
ttagatgcgattgaaacacatcacatcagtttcctgtttgcagtgtctgcacagttggag
agtctactgtcttatcgaggtcctgagttcgatttgagttcactgcggtgtttggtgtcg
tcgtcagcggtgctaaatgctgattctaaaaaggcattactagagaaactcgattgcgcc
tttcatgaatgttatggtgcatctgaggtgggcgtagtaacggatttttgtgtatcggat
ctgccaaacaaaaatggcagtgttggaaaaccactgccatttgtagatataaaaatctgt
tctcctgagcgtgctctgcttgatgcaggccagattggtgaaattgcctgcaagacaatt
acaggcttcagtggctatcataaaatgcctgatgcgactcatgaggcgtatgatgcgcaa
ggttatttttatactggtgatttggggtatattgatgaacagggatatttatactacgtt
ggcagaaagaaagaagtgatctccagtggagggataaatatctttccacaagatattgaa
tctgtgataaagcgtcatcccgacattattgaatgtgtcgcatttggtgttgaagagcct
cagttgggtgagattatcaaagtcgtttatgaacagcgtagtgatgaatcattagataaa
gtactgcgcttaatgtgtttgcaggaactgacggattatcagcagcccagacacttggtg
agattacccgaaatgccacgaaatcaaatgggtaaagttttaagaaatgatgtgaagtta
caaaaccaataa
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