Pseudoalteromonas luteoviolacea: S4054249_06345
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Entry
S4054249_06345 CDS
T04577
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz02020
Two-component system
plz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
S4054249_06345
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
S4054249_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plz03000
]
S4054249_06345
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plz02035
]
S4054249_06345
Transcription factors [BR:
plz03000
]
Prokaryotic type
Helix-turn-helix
Other families
S4054249_06345
Bacterial motility proteins [BR:
plz02035
]
Flagellar system
Flagellar assembly proteins
Others
S4054249_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
HTH_50
AAA_5
Mg_chelatase
AAA
AAA_7
AAA_16
MCM
TIP49
Motif
Other DBs
NCBI-ProteinID:
AOT07483
LinkDB
All DBs
Position
1:1457353..1458789
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AA seq
478 aa
AA seq
DB search
MILIIDNNNNRASGLAAALSFCGQPACVVAESDFSPELVKKYQECKVVLGALDGLDHERH
IKSLPAQPFILVGETLRPLLSLANVIGLITEPFSHDVTMQLLHDCQQYLSLLPGQTEQGR
DAKSFDGLVGDTDAVKEVRFLISQVAQTDANVLILGESGTGKEVVARNVHLLSNRSDGPF
VPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAQNGTLFLDEIGDMPLQMQVKL
LRVLQERSYERVGGTKPIQANVRVIAATHRNLEEMIEEGKFREDLFYRLNVFPIENPSLS
QRVDDIPLLLKELLRRVTEQGNKGVKFTDRAVESLKSHAWPGNIRELANLVERMAIMFPD
KLVDVTDLPTKYRYIEVEAFEPEYPEELMERDAFNDLFSEGFSDFEEEEEIIAPEQPMLG
LLPDEGIELKDYLADLEVSLITQALERYDYVVARAAEILGVRRTTLVEKMKKYNLNRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatactgatcatcgataacaacaataatcgcgcttctggactagctgccgcgttgtca
ttttgtgggcaaccagcatgcgtggttgctgaatctgacttttcccctgagttggtcaaa
aaatatcaagaatgcaaagtcgtattgggtgcactcgacggattggatcatgagcgccac
ataaaaagcctgcctgcgcagccgtttatactagtcggagagacgctaagacctttgtta
tccctggcaaatgtaattgggttgatcacagaaccatttagccacgatgtgacaatgcaa
ttgttacatgactgtcagcagtatttaagcttattaccgggtcaaacggagcaaggtaga
gatgcgaagtcatttgatggccttgttggggatacggatgcagtcaaagaagttcgcttc
cttatttcacaagttgcacaaacggatgccaatgtcctgattttaggtgagtcaggaaca
ggtaaggaagttgtagctcgtaatgttcatttgctttcaaatcgttcggatggcccgttt
gtaccagtaaattgtggcgcgatacctggagagctacttgagagtgagttgtttggccat
gaaaaaggcgcatttacaggcgctatttctgcgagaaaagggcgctttgaacttgctcaa
aatggcaccctatttttagatgaaattggcgatatgccactacaaatgcaagttaagcta
ttgcgtgttttacaagagcgcagctatgagcgagttggtggaaccaagcctattcaggcg
aatgtccgtgttattgctgcaacgcaccgcaatcttgaagagatgatagaagaaggtaag
tttcgagaagacttattttatcgtcttaatgtttttccaatagaaaatccgtctttgagt
cagcgtgttgatgatattcctttgttgttaaaagagttacttcgtcgagtaacagagcaa
ggtaataaaggcgtgaagttcactgatagagcggttgagagccttaagtcacatgcatgg
cctggaaatatacgtgagttggctaacttggtagaacgaatggcgattatgtttcctgac
aaattggttgatgttacagatttaccaacaaagtatcgttatattgaagtggaagctttt
gagcctgaatatcctgaagaacttatggaaagagatgccttcaatgacttgtttagtgaa
ggttttagtgattttgaggaggaagaggagatcatagcgcctgagcaacctatgcttggt
ttactgcctgatgaggggatcgaattaaaagattacttagcagatttagaggttagcctt
ataactcaagcattggagcgatacgattacgtggtggcacgagccgcggaaatattgggt
gtaaggcgcacaacacttgtggaaaaaatgaagaagtataatctcaacagagattag
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integrated database retrieval system
