Pseudoalteromonas luteoviolacea: S4054249_11465
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Entry
S4054249_11465 CDS
T04577
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plz03032
]
S4054249_11465
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_11465
Enzymes [BR:
plz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
S4054249_11465
DNA replication proteins [BR:
plz03032
]
Prokaryotic type
DNA Topoisomerases
S4054249_11465
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
S4054249_11465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AOT08424
LinkDB
All DBs
Position
1:complement(2697678..2700311)
Genome browser
AA seq
877 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYIVKSSVGHVRDLPTSGAGKTKGVATKSPAEVRKMS
PEEKAAYRKQKDYANLVARMGIDPEKGWEPHYEVLPGKEKVVQELTKLAQDADHIYLATD
LDREGEAIAWHLEEIIGGDASKYKRVVFNEITKNAIQQAFEAPGQLNTDMVYAQQARRFL
DRVVGFMVSPLLWQKVARGLSAGRVQSVAVRLLVEREREIKAFIPEEFWDIHADTKLAAT
DVRFAVTKYQGQAFKPVNEKEALKAVSEIENASLSVVKVEEKPSKSKPSAPFITSTMQQA
ASTRLGYGVKKTMMLAQRLYEAGFITYMRTDSTNLSNDAVEMCRDYIQGNFGDKYLPKTP
IKYSAKGNAQEAHEAIRPSDVNVLSGHVEGVDADAKKLYELIWRQFVACQMTPAEYDLTN
ITLGANDYTLKARGRVLRFDGWTKVQPAVRKKSEEEQALPAVAVGDSVDLVNLDPKQHFT
KPPARYSEASLVKELEKRGIGRPSTYAAIISTIQERGYVRVENRRFFAEKMGEIVTDRLV
ENFNDLMNFDFTAKMEGRLDDIAEGEREWTQVLDKFYADFSNQLELAGQDEADGGMRQNV
MVETDIDCTTCGRKMGIRTASTGVFLGCTGYSLPPKERCTTTMNLISGDEAIDADVEDAE
TESLRQKKRCPICETAMDSYLIDETRKIHVCGNNPACGGYVVEQGTFKIKGYDGPVIECD
KCGADMQLKSGRFGKYFGCTKEDCKNTRKLLKNGEPAPPKEDPVPLPELECEKSDAHFVL
RDGASGIFLAAHTFPKSRETRAPKVAELKRFRDRISPKFYYLADAPEKDGDGNLAVVRYS
RKTKTQYVMTEVEGKATGWKATFVEGKWVEEEKKRKK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctagtaatcgtagagtctcccgcaaaggccaaaactattaataagtat
ttgggaaaagactacattgtgaaatccagtgtgggtcatgttcgtgatctaccaacgtca
ggtgcgggcaaaactaaaggtgttgctactaagtctccggctgaagtacgtaaaatgtca
cctgaagaaaaggcggcatatcgcaaacaaaaggactacgctaatttagttgcaagaatg
ggtatagacccagagaaaggctgggaaccgcactatgaagtgttaccaggcaaagaaaaa
gttgttcaagagctcactaagcttgcacaggatgctgaccatatctatctcgcaaccgat
ttggatagagagggagaagcaattgcatggcaccttgaagagatcattggtggtgatgca
tcaaagtataagcgtgtggtattcaatgagataacaaaaaatgctattcagcaggcgttt
gaagcaccaggacaactcaatactgatatggtttatgcacaacaggcgcgtcgattctta
gaccgtgttgttggtttcatggtttcaccattgctgtggcaaaaagttgcaagaggctta
tctgcgggccgtgtacagtcagttgctgttcgtttgttggttgagcgtgagcgcgaaatt
aaagcatttattcctgaagagttctgggatatccatgcagatactaagttggcggcgacg
gatgtaagatttgctgttactaaataccaaggccaagcatttaagcctgtaaacgagaaa
gaagcgctcaaagcggtttcagaaattgaaaacgcgagcctgtctgttgttaaagtagaa
gaaaagccaagtaaaagtaagccgagtgcgccttttattacttcaacaatgcagcaagca
gcaagtacacgtttaggttatggcgtaaagaaaaccatgatgttggctcagcgcttgtac
gaagccggcttcataacgtatatgcgtactgactcaacaaacttgtctaatgacgctgtt
gaaatgtgtcgtgattatattcagggcaactttggcgataagtatttaccaaagacacca
attaagtacagtgcgaaaggcaatgcacaagaagcgcacgaagcaattcgtccttctgat
gttaatgtgttgtctggacatgttgaaggtgtagatgccgacgctaaaaagctatatgaa
ttaatctggcgtcagtttgttgcttgtcaaatgacacctgcggaatatgatctaaccaac
attacattaggtgccaatgattacacgttaaaagcgcgtggtcgtgtacttagatttgat
ggttggacaaaggtacaaccggctgttcgtaagaagagtgaagaggaacaagctctgcca
gctgtggctgttggtgacagcgttgaccttgtaaaccttgatccaaaacagcactttacg
aagccaccagcgagatacagcgaagcaagtttagttaaagagttagaaaagcgtggtatc
ggtcgtccatcgacttacgctgctattatttcgacaattcaagagcgcggctatgtgcgt
gttgagaatagacgattctttgcagaaaaaatgggtgagattgtcacagatcggttagtc
gagaattttaacgatctaatgaactttgactttaccgcaaaaatggagggtcgccttgat
gatatcgctgagggtgagcgagagtggacacaagtattagataagttttatgcggacttt
tcaaatcaacttgagttagctggtcaagatgaagccgacggcggcatgcgtcaaaatgtg
atggttgaaacagatattgactgtactacctgtggtagaaaaatgggtattcgtaccgcg
tctacaggggtattcctagggtgtactggttatagcttgccgcccaaagagcgctgtacg
acaaccatgaatctgatttctggtgatgaagcaatcgatgctgatgtggaagacgctgaa
acagaaagccttagacaaaagaaacgttgcccaatctgcgaaacagcgatggactcatat
ttaattgatgaaactcgcaagatccatgtttgtggtaataaccctgcatgtggtggttat
gtcgtagagcaaggtacattcaagattaaaggctatgatggcccggtcattgagtgtgac
aagtgcggtgcggatatgcagcttaagtcaggccgttttggtaaatactttggttgtaca
aaagaagattgtaaaaacacgcgtaaattactgaaaaatggtgagcctgcgccaccgaaa
gaagatccggttccattacctgaactagagtgtgagaagtcggatgcacattttgtgctt
cgtgatggcgcttctggtattttcttagcggcacatactttccctaaatcaagggagaca
cgtgcacctaaagttgctgagctgaagagatttagagatagaatttctcctaagttttat
tatttagctgatgcaccagaaaaagatggggatggtaatttagcggtcgtgagatattct
cgcaaaacgaaaactcagtatgttatgacggaagttgaagggaaagccactggctggaag
gcaacttttgttgaaggcaagtgggttgaagaagagaaaaagcgcaaaaagtaa
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