Pseudoalteromonas luteoviolacea: S4054249_15680
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Entry
S4054249_15680 CDS
T04577
Name
(GenBank) transcriptional regulator
KO
K06980
tRNA-modifying protein YgfZ
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plz03016
]
S4054249_15680
Transfer RNA biogenesis [BR:
plz03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
S4054249_15680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
OpgB_M
Motif
Other DBs
NCBI-ProteinID:
AOT09196
LinkDB
All DBs
Position
1:3698778..3699686
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AA seq
302 aa
AA seq
DB search
MATVYQLPLRLLSVTGQEKLSYLHGQVTQDINLVQENNFLWTGHCSPKGKLWAALRVFRF
NEAYCLIGSEPEVEVACRELSKYGVFAQVDINITDHKCFGVLNDAAIEVCETLGLEFDAD
SNACQFAAGKGLKLNDGSLILIFDSAETMPEVLTVETDPSAFQIRDILAGEPQLGEHGID
EFVPQMVNLQALNGISFKKGCYTGQETVARMRYLGKNKRAMFIVQGQSQSPLDIKDLEMQ
LEENNWRRAGKVIHQAYDSITKTYYALAVLPNDLEDSAILRPKDNDSVSLAIKALPYSIE
DN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtataccaactccctcttcgcttactctcagtaaccgggcaagaaaaactt
agctaccttcatggacaagtaactcaagatattaacctagtccaagagaacaacttccta
tggacaggccactgcagcccaaaaggtaagctgtgggcagcactgcgtgtttttcgtttc
aatgaggcctattgtttaattggatcagaacctgaagttgaagtggcatgtcgcgaattg
agtaaatatggtgtatttgcacaagtagacattaacattaccgatcataaatgttttggt
gtactcaatgacgcggcaattgaagtgtgtgagacccttggactagaatttgatgctgac
agcaatgcctgtcaattcgcagccggaaaaggcctgaaactaaatgatggcagcctcatc
ttaatctttgatagtgctgagactatgcctgaagtgcttactgttgagaccgatccgagc
gcttttcagatccgtgatattctcgcgggtgaaccacagctaggtgagcacggaatagat
gaattcgtaccgcagatggtcaacctgcaagcactaaatgggattagcttcaaaaagggc
tgctatactggtcaagaaacagtcgctcgaatgcgctacctcggcaaaaataagcgtgct
atgtttatcgtacaaggccaatcacaaagccctttagatattaaagaccttgaaatgcaa
ctagaggaaaacaattggcgcagagccggtaaggttattcatcaagcatacgactcaata
acaaaaacctattatgcattggcagtcttaccaaatgatttagaagattcagcaatattg
agacccaaagataacgactcagtatcgctagccattaaggcattaccatactctatagaa
gataactaa
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