Pseudoalteromonas luteoviolacea: S4054249_17300
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Entry
S4054249_17300 CDS
T04577
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_17300
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
S4054249_17300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
T1R_D3-like
Zn_ribbon_3
AAA_16
AAA_30
AAA
TUSC2
zf-tcix
Zn_Ribbon_1
DZR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AOT09493
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Position
1:complement(4047317..4049068)
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AA seq
583 aa
AA seq
DB search
MRCVIYTLRPYQKEAVENTITHFRKSSKPAVIVLPTGAGKSLVIAELARVAKRKILVLTH
VKELVEQNAQKYESYGLTASIFSAGLNKKALDQQVTFASVQSLARNLELLNTFYSLVIID
ECHRVSGEDDSQYMQVLKRLREFNTDLKLLGLTATPYRLGLGWIYHEHYHGFVRGEKDSP
FDKCIYELPLRYMIRNEYLTPPKQVDPAIDNYDFSALKPDRFGRFSESDMNSLLSSHTRA
TKSIIEHVLSESQSRQGVMIFAATVLHAKEIVRYLPSEETELVIGDTDNKLRDNIILRFK
NKEIKFLVNVSVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLDKGKKDCLVIDYA
GNEFDLFHPEVGSIKPNPDSEPVQVLCPGCGFANTFWGKLDEQGALLEHYGRRCQGVLEN
EAEGESVQCDYRFRFKECDHCGAENDIAARQCLSCGEVMADPDDKLRDALNLKNALVLRC
CGMTSEVIKSEVLKVTYFDEDGAEASEVYDFSNKGSKFYFHKNFAKRLKSAGQVGQWHSV
NEVDIAKLNAPDFVIAKQHKKYGWQIVEKIFDYKGGYRVADKS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcgttatttatacgcttaggccctaccaaaaagaagctgttgaaaacaccatt
actcatttcaggaaaagtagtaaaccagcggtgatagtactaccaacaggagcaggaaaa
agtctcgttattgcagagttagcgagagtggcaaaacgaaaaattttggtgcttacccat
gtgaaagagctcgtcgagcaaaatgcgcagaaatatgagagttacggcctcacggcgagc
atattttcagctggcctaaataaaaaagcgttagaccaacaagtcacttttgcatctgtg
caatccttagctcgaaatttggagctgctaaatacattttactcattagttataattgat
gagtgtcaccgtgttagtggcgaagacgatagccaatatatgcaagtgctaaagcgctta
agagagttcaatactgaccttaaactacttgggttgaccgctacaccgtatcgacttggt
ttaggttggatatatcatgagcattatcatggctttgtccgtggtgaaaaagacagccca
tttgataaatgtatatatgaattaccacttcgctatatgatccgcaatgaatatctcacc
ccacctaaacaagttgatccagcaatagataactacgacttttctgcattaaagccggat
cgatttgggcgattcagtgaaagcgacatgaatagtttgttgagctcccatacacgagcc
acaaaaagtattattgagcatgtgttaagcgagtcacaatctcgacagggcgtgatgata
ttcgctgcaacggtattacatgcgaaagaaattgttcgctatttaccaagtgaggaaact
gagttggtgattggagatactgacaacaagctgcgcgataacattattttgcgatttaaa
aataaggaaattaaatttttagtgaatgtatctgtattgacaacggggtttgatgcacca
catgtcgactttattgccatattgagaccgacggaatcagtgagcttataccaacaaatt
gttggtcgagggttacgcttggataaaggcaaaaaagattgcttggtaattgattatgcg
ggcaatgagtttgacctttttcaccctgaggtcggttcaattaaaccgaaccctgatagc
gagccggtacaagtcctatgtcctggttgtggctttgccaatacattttggggcaagctg
gatgaacagggagcgcttttagagcattatggtaggcgttgccaaggcgtgttagaaaac
gaagctgaaggcgaatctgtacagtgtgactatcgattcagatttaaagagtgtgatcac
tgcggcgcagagaatgacattgcagctcggcagtgtttaagctgcggagaagtgatggct
gatcctgatgataagctccgtgatgcactgaacttaaagaatgcactagttttgcgttgt
tgcggcatgacatctgaagtgattaaatcagaagtactcaaagttacatattttgatgaa
gatggagcagaagccagtgaagtttatgactttagtaataaaggtagtaaattttatttc
cataaaaactttgcaaagcggcttaaatcagcagggcaagtaggtcaatggcatagtgta
aatgaggtcgatatcgcaaaattgaatgcgcccgattttgttatcgccaaacagcataaa
aaatatgggtggcaaatagttgaaaagatttttgattataaaggcgggtatagggttgcg
gacaaaagttaa
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