Pseudoalteromonas luteoviolacea: S4054249_18130
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Entry
S4054249_18130 CDS
T04577
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plz03009
]
S4054249_18130
Enzymes [BR:
plz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
S4054249_18130
Ribosome biogenesis [BR:
plz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
S4054249_18130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Ribosomal_L22e
CTD1
SYY_C-terminal
ThiS
Motif
Other DBs
NCBI-ProteinID:
AOT09621
LinkDB
All DBs
Position
1:4212214..4212924
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AA seq
236 aa
AA seq
DB search
MKFPCRIDKFVSHINELPRSKVKILIKKGAVAINGEVTKKSDTQIHADDLIEVSGKHLKY
LGKRYFMLNKPQGYICANHDELHPTVFDLLNEPNLKNFHVAGRLDIDTTGLVLITNDGDW
SHQITSPKKEKFKTYLVETKEIITEDCLEKLRQGVALHNEKQHTRPALAQAIDKYALRLS
ICEGKYHQVKRMLAAVGNHVVELHREKISDIILDPNLAMGEYRHLTQQEVDIINAK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttccatgtcgtatagacaaatttgttagtcacataaacgagcttccacgtagt
aaagtaaaaatcctgatcaaaaaaggagcggtggctataaatggtgaagtaactaaaaaa
agtgacactcaaatccacgctgacgacctcattgaagtaagcggtaaacacctgaaatat
ttaggtaaaagatatttcatgctcaataaaccacaaggctatatctgcgccaaccatgac
gagctacaccctactgtttttgacttgcttaatgaacctaacttaaaaaattttcatgtc
gcgggtcgacttgatatagatacaacagggctggtactgatcaccaatgatggcgattgg
tcacatcaaataacatcgcctaaaaaggagaaattcaaaacataccttgttgaaacaaaa
gaaataatcacagaagactgtttagaaaaactgcgccaaggtgtggcattgcataacgaa
aaacaacatactcgcccagcacttgcacaagccatcgacaaatacgctctaaggctatcg
atttgtgaaggaaaataccatcaagtgaagcgtatgctggctgctgtaggcaatcatgtt
gttgaattacatagagaaaaaattagcgatatcatactagatcccaatctcgctatgggt
gaatatcggcacctaactcaacaggaagtcgacataatcaatgcaaaatag
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