Pseudoalteromonas luteoviolacea: S4054249_20170
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Entry
S4054249_20170 CDS
T04577
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz00300
Lysine biosynthesis
plz00470
D-Amino acid metabolism
plz01100
Metabolic pathways
plz01110
Biosynthesis of secondary metabolites
plz01120
Microbial metabolism in diverse environments
plz01230
Biosynthesis of amino acids
Module
plz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
S4054249_20170 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
S4054249_20170 (dapF)
Enzymes [BR:
plz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
S4054249_20170 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AOT09988
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All DBs
Position
1:4749307..4750137
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AA seq
276 aa
AA seq
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MFVNFSKMHGLGNDFVVIDNVTQNVFLSRDQIKKLADRHFGIGFDQLLLVEPPYSPDLDF
HYRIFNADGTEVEQCGNGARCFARFIRMKGLTNKHKVNVSTKGGDITLYTEKDGQVTVNM
GTPQFAPQDIPFKAQQSELTYVLRANEHTIFCGAVSMGNPHCIIEVDDINTADVETLGPL
IEHHERFPKRTNVGFMQIINREHIKLRVWERGAQETLACGSGACGAVAVGIAQGKLADTV
RVDLPGGTLQVRWSGGNKPVKMTGPAEHVFDGQVAI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaaatttttcaaaaatgcatggcttaggaaacgattttgtggtgattgataac
gtcacacaaaacgtttttttgtcgcgcgatcaaattaaaaagctcgcagatagacatttt
ggcattggcttcgatcaattattgctggtcgagccgccttattccccagatttagatttt
cattatcgtatttttaatgccgatggcactgaggtagagcaatgtggcaacggtgcacgc
tgctttgcccgctttatcagaatgaaagggctgactaacaagcacaaagtcaatgtctcg
actaaaggtggtgatattactttgtatactgaaaaggacggccaagttactgtcaatatg
ggcacaccgcaattcgcgccacaagatattccctttaaagcacaacaaagtgagctcact
tatgtgctaagagccaatgaacacaccattttttgtggcgcggtctccatgggtaaccca
cactgtattatcgaagttgatgatataaataccgctgatgtcgagacactaggcccgctc
attgagcatcatgaacgctttccaaaacggactaatgtcggcttcatgcaaatcattaac
cgagaacatatcaagcttcgagtatgggagcgtggtgcacaagagactttagcgtgcggc
agcggtgcatgtggcgccgtggctgttggcattgcacaaggcaagttagctgatacggtg
cgcgttgacttacctggtggcacgttacaagtgcgctggagtggcggcaataagcccgtc
aaaatgacaggccctgcggaacatgtttttgatggacaggtagcaatatga
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