Pseudoalteromonas luteoviolacea: S4054249_20615
Help
Entry
S4054249_20615 CDS
T04577
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plz03016
]
S4054249_20615
Enzymes [BR:
plz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
S4054249_20615
Transfer RNA biogenesis [BR:
plz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
S4054249_20615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AOT10068
LinkDB
All DBs
Position
1:complement(4846856..4847380)
Genome browser
AA seq
174 aa
AA seq
DB search
MAAKRLFFGIGLAPQQTTHIQSWLSQHVKAKKAPTLSRNWHLTLAFLAQVDKAQEDDVIA
FANRLMLPFFQLHFASTGYWSHNGIFYLQPDHINAALRSLAEPLREYGEKLGLYRNPYPF
SPHITLFRGVKPMPLVDVPIEPFSLDVTHFHLYQSHSLDDGLHYTPVETFALNA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcaaagcggctgttttttggtattgggctggcgccgcaacagacaacacatatt
caaagctggcttagtcagcatgtgaaagcaaaaaaagcaccgacgttgtctcgcaattgg
catttgacgctggcctttcttgcgcaggtagataaggcgcaagaagatgatgtcattgca
ttcgctaatcgcttaatgttgccgttttttcagttgcactttgcgagcactgggtattgg
tctcataatgggatattttatttgcagcccgatcacataaatgccgcattgcgcagcctt
gcagagcctctgcgtgaatatggggagaagttaggactgtaccgaaacccttatccgttt
tcaccccatataactttgtttcgcggtgttaagcctatgcctctagtggatgtacctatc
gaacctttttcactggatgtgacgcacttccatttatatcagtcacactcccttgatgac
gggcttcattacacgccagtcgagacgtttgcgcttaacgcttaa
DBGET
integrated database retrieval system
