Pseudoalteromonas luteoviolacea: S4054249_22160
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Entry
S4054249_22160 CDS
T04577
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_22160
Enzymes [BR:
plz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
S4054249_22160
DNA repair and recombination proteins [BR:
plz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
S4054249_22160
Prokaryotic type
S4054249_22160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOT10569
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All DBs
Position
2:334819..336201
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AA seq
460 aa
AA seq
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MSKALFWFRRDLRLSGNQALEDAINNGATEALFFVCEKQWQSHKTSEIQVDLVKRRIDYL
GGQLAELGITLHVIDAQDFQQLPSRLEEFIARHGFTHIYANREYEINELNRDEQCMSLGA
ELHLYDGDVLCPPGSVVTKGGEMFKVFTPFKKAWLSQYSQYTFPISEYIRSVNQPVAWQT
SDLLATNGASEKWPVDDHVLSQVIEQFLEDKLNEYSEYRDIPSIKGTSGLSPYLALGIIS
AKDIIGRIQQRMPDVLYRTKTSAFTYINELLWREFYRHLMFIFPKLCKGNNFNEKYNAVQ
WLDDEEAFSSWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKHLLIDWRKGEAY
FMSKLIDGDLAANNGGWQWAASTGCDAQPYFRIFNPITQSEKFDPDGTFIRKYVQELEWV
PAKYIHFPHDYINAVGRPCYTAPIVEHKEARARALDAFKV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagcacttttttggttcaggcgtgatctaaggttatctggtaaccaagcgctt
gaagacgcaattaacaacggcgccactgaggcgctgttttttgtttgtgaaaaacaatgg
caatcacacaagaccagtgaaatacaggttgatttagttaaaaggcgtattgattatctt
ggaggtcaattagcagagttgggtataacgcttcatgtgattgatgcacaagactttcag
caactacctagtagacttgaagaatttattgcacggcatggttttactcatatctatgcc
aatagagagtacgaaattaatgaattaaaccgtgatgaacagtgcatgtcattaggggct
gagctgcatttgtatgatggtgatgtgctttgtccacccggtagtgtagttactaaaggt
ggagagatgtttaaggtctttacaccgtttaaaaaagcatggctgtcacaatattcacag
tatacttttccaataagcgagtatattcgctcggtaaatcagcctgttgcttggcaaaca
tcggacttgttagctactaacggtgcttctgaaaagtggccagtagatgaccatgtactt
tctcaggttattgaacaatttttagaagataagttaaacgaatatagtgaatatcgagat
atacccagtattaaagggacctctgggttgagtccttatcttgcattagggattatatct
gcaaaagatataattggccgaattcaacaacggatgccagatgtattatatagaactaaa
acctctgcatttacttatataaatgagttactttggagagagttctatcggcatttaatg
tttatctttccaaaactgtgcaagggcaataattttaatgaaaaatataatgcggtgcag
tggctagatgatgaagaggcattttcatcatggtgtgaaggtaagacagggtaccccatt
gtcgacgcagctatgcgtcagttgaatcaaactgggtggatgcataatagactgagaatg
atcgttgcgagctttttaactaaacacttattaattgattggcgtaaaggtgaagcttac
ttcatgagtaagctcattgatggtgatctggctgcaaataatggtggttggcaatgggct
gcgagcactgggtgcgatgcacagccatattttagaatatttaatccgataacccaaagt
gaaaagtttgatcctgatggaacttttattcgtaaatatgtacaagaattagaatgggtg
cctgctaaatatattcattttcctcatgattatattaacgctgtcggcagaccgtgttat
acagcacctatagttgaacataaagaagcgagagccagagcgcttgatgcatttaaggta
tag
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