Pseudoalteromonas luteoviolacea: S4054249_22195
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Entry
S4054249_22195 CDS
T04577
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plz03032
]
S4054249_22195
03036 Chromosome and associated proteins [BR:
plz03036
]
S4054249_22195
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_22195
DNA replication proteins [BR:
plz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
S4054249_22195
Chromosome and associated proteins [BR:
plz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
S4054249_22195
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
S4054249_22195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
SSB
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AOT10576
LinkDB
All DBs
Position
2:341225..341500
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AA seq
91 aa
AA seq
DB search
MNKAQLVEKIANDADISKTAAGRALDALTSAVTEALKDGDSVALVGFGTFSVKERAARTG
RNPQTGAEIQIPAANIPSFKAGKGLKDQVNL
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctcaactagttgaaaagatcgcgaacgacgctgatatctctaagacggca
gctggccgtgcattagatgctttaactagtgctgtaactgaagctctaaaagatggcgac
tcagtagcactagttggttttggtactttctctgtgaaagagcgtgcagcacgtacaggt
cgtaacccgcagactggcgcagaaatccaaatcccagctgctaatatcccaagcttcaaa
gcgggtaaaggtctaaaggatcaagttaacctgtaa
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