Pseudoalteromonas luteoviolacea: S4054249_23395
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Entry
S4054249_23395 CDS
T04577
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
plz
Pseudoalteromonas luteoviolacea
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_23395
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
S4054249_23395
Archaeal homologous recombinant proteins
S4054249_23395
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Suv3_N
Motif
Other DBs
NCBI-ProteinID:
AOT10799
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All DBs
Position
2:680691..681911
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AA seq
406 aa
AA seq
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MKVVHTSDWHLGQQFYEHNRFEEHQAFLNWLIQELVEVDADLLVVSGDVYHTATPPAAAE
QQLYTFIKHAKSVLPHIHIVIIAGNHDSANRIETAKPLLQQFDTHVVGRYNKHAPEDVVK
RIETRAGAVYVVAMPFLRSADIAHVDTDDSGYAQAVQQAYHQAYEQIHDTTMPVVTLGHL
HAKGGDISSDSERNITIGGFDSIHADVFGSTSDYVALGHLHKAQKVANNDAIRYSGTPFP
MSFSERNYQHQVLLVEFSGKQVLEITPRYVPRHKQVILLPEKGGATLAALCQAIQDLKLP
TDATAPKPYLRLRLNANETDSQFRHKIEQALIGKHVHFCGIERVSQSTDHESAVLFEDLS
KVNELAPLTLLELAYKEQIDKESALPQELQACLETVLVSLNEQGDL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtacacacgtcagactggcacctcggtcaacaattttacgaacataatcgt
tttgaagaacatcaggcttttttaaattggcttattcaagagctagtcgaagttgatgct
gatctgcttgtcgtcagcggtgatgtttaccatacagctaccccgccagcggctgctgag
caacagttatatacatttataaagcatgcgaagtcagttttaccacacattcatattgtg
attattgcgggcaaccatgactccgccaaccgtattgaaaccgcaaagccattattacag
caatttgatacacatgttgttggcagatataacaaacatgcacctgaagatgtcgtcaaa
cggatcgaaacgcgcgccggtgccgtgtatgtggtggcgatgccttttttacgcagcgct
gatatagcgcatgtggatacagatgattcaggttatgcacaagcggtgcagcaggcgtat
caccaagcatatgagcagatccatgatacaaccatgccagtagtcactttgggtcattta
cacgctaaaggtggagacatttcttcagattctgagcgcaatataaccattggtgggttt
gattctattcatgctgatgtttttgggagcacctctgattatgtggcgcttggccacttg
cataaagcacaaaaagtagctaacaacgatgcgattcgatacagcggtacaccttttcct
atgtcattttctgagcgcaactatcaacatcaagtactactggtagagttttctggaaag
caagtattagagatcaccccaagatatgtgcccagacataagcaagtcatcttattgcca
gagaaaggtggggcaacattagcagcgctctgccaagcgattcaagatttaaagttgcct
acggatgctactgcgcccaaaccttatttaaggttacggttgaacgccaatgaaaccgac
agccaatttcgtcacaaaattgaacaggcattgattggtaaacacgtccatttttgcggc
attgagcgtgtctcgcaatctacagaccatgaaagcgctgtgttgtttgaggacttaagt
aaagtcaatgagcttgcccctcttactttgttagagttggcttataaagaacaaattgat
aaggaatctgcgttgccacaagaactacaagcgtgcttagaaacagtattggtttcatta
aatgagcaaggagatttatga
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