KEGG   Pseudoalteromonas luteoviolacea: S4054249_24150
Entry
S4054249_24150    CDS       T04577                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
plz  Pseudoalteromonas luteoviolacea
Pathway
plz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:plz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    S4054249_24150
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plz02044]
    S4054249_24150
Secretion system [BR:plz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   S4054249_24150
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 ATPase_2 nSTAND3 AAA_7 AAA_18 NBD_SMAX1 bpMoxR Sigma54_activat IstB_IS21 AAA_24 T2SSE AAA_6
Other DBs
NCBI-ProteinID: AOT10934
LinkDB
Position
2:905517..908234
AA seq 905 aa
MDATGIKQLIDKLNAHTASALEAAAGFAASRQHYEVLPEHLLLKLMEDHHEGDVAKILPF
FEIDQDTLWHEALNFINQQDAANQGKPVFSRRLYELLERAWLTANVKHRSEWITGAALLD
AFKDLVPFSPAFGLARELDKLDIHFLKDNLDKICKGSTERMAFQPVESGRASTLLQNGQD
AEQTALDSFCEDLTEKAASGGIDPVLGRSEEIRLAIDVLCRRRKNNPIFVGDPGVGKTAV
VEGLAQRIVAKTVPDELVSVRIMVLDMGLLQAGAGVKGEFERRLKQVIDDVKSSSTPIIL
FIDEAHTLIGAGGDAGMGDAANLLKPALARGELRTLAATTWSEYKQYFERDAALERRFQL
IKVDEPSEHNAKLMLSGIKEKYEQHHQIHITDSAIEAAVSLSARYITGRQLPDKAIDVLD
TAAAAVRMGAATSPVIIENAQERVTYLTERLARLEQEAELGIESDVVSAELAAELDQAQS
ELAAMQARRAEQLDTHASIASAQQSQLPEYRRQLKSLNEEGNAVFCEVDQDTVAQVIANW
TGIPVGNMVKDELQNLLALEQSLGAQVVGQEQGLSALAQSLRVAKAGVSASSGPLGVFLF
SGPSGVGKTETARHLANVLFGGDKFLTTINMSEYQESHTVSQLKGSPPGYVGYGEGGVLT
EAVRQRPYSVVLLDEVEKAHPDVLNMFYQVFELGMMRDGEGREIDFKNTVIIMTSNIAAE
QISKACRAPNQDDEDVLAKAISEAQGLLNQQADETPTADEGCDEEAQTPWTMPSLSELNN
LIKPELLNHFAPALLARMQVIPFKPLDSDALENIVALKLEKVAARLSENHQITLRVDQSV
LSHLSKQCALSDSGARLVNATIEQQILPGVARSILGFLSEEDMPDLLTLTLNDDGQIEAV
FADLA
NT seq 2718 nt   +upstreamnt  +downstreamnt
atggacgcgacaggcattaagcaacttattgataaattaaacgcacataccgcaagcgcg
cttgaagcagcggcaggctttgcagctagccgccagcactatgaagtcttgcctgaacat
ctactgcttaagctgatggaagatcaccacgaaggtgatgtggctaaaattctgcctttt
tttgaaattgaccaagatactctgtggcacgaagcgctgaactttattaatcaacaagac
gcagccaatcagggcaaacctgtgttttcccgtcgtttatatgaattattagagcgtgct
tggctcactgccaatgtgaagcaccgcagtgagtggatcactggggctgccttgcttgat
gcgtttaaagatctcgttccatttagccctgcatttgggttggcgcgagagcttgataag
ctcgatattcactttttaaaagacaatctcgataaaatttgtaaaggctcgactgagcgc
atggcgtttcaacctgtggagtcgggcagagcgagcacgttgctgcaaaatggccaagat
gcagagcaaacggcattggactcattttgtgaagacctaactgaaaaagcggccagtggc
ggcattgatccggtacttggacgcagcgaagagatccgtttggcaatcgatgtattgtgt
agaaggcgcaagaataacccgatttttgtcggcgacccaggggttggcaaaacggcggtg
gtggaaggccttgcacagcgcatcgttgccaaaacggtgccagatgaattggtgagtgtg
cggatcatggtgttagatatgggcttgctgcaagcgggcgctggggtaaaaggcgagttt
gaacgccgtttaaagcaagtgattgacgatgtgaagtcatccagcacgcccattattctc
tttattgatgaagcgcataccttgatcggtgctggtggcgatgccggtatgggcgatgca
gcgaacttactgaaacccgcactggcgcgaggcgagctgcgtacactggcggccaccact
tggagcgagtacaaacagtattttgagcgcgatgctgcccttgaaagacgctttcagttg
attaaagtcgacgagcccagcgagcacaatgccaaactgatgttgagtggcattaaagaa
aagtacgagcaacaccatcaaattcatattaccgacagcgccattgaagcggcagtgagt
ttatcggcgcgatatatcacgggcagacagttgccagacaaagccattgatgtgctcgac
actgcggcggcagcagtgagaatgggcgccgccacctctcctgtgatcatcgaaaatgcc
caagagcgcgtcacctatttaaccgagcgtttggcgcgattagagcaagaggcagagctg
ggcattgagagcgatgtggtcagtgcagagttagccgctgaacttgaccaagcgcaatca
gagctcgctgcaatgcaagcgcgccgcgctgagcaactagacacccatgcctcgattgcc
agtgcacagcaaagccaattgccagaatatcgccgccaattgaaatcgttaaacgaagag
ggcaatgcagtcttttgcgaagttgatcaagataccgtggcacaagtgattgctaactgg
acagggatccccgtgggtaatatggtcaaagatgagctgcaaaacctccttgcgcttgag
caaagcttaggtgcgcaggtggtaggccaagagcaagggctaagtgcgctggcgcagtca
ttgcgtgtggccaaagctggggtatcggcatcttcaggcccgcttggggtgtttttattc
agtggtccatctggggtgggtaaaacagaaaccgctcgacatttggccaatgtgctattt
ggcggtgataagtttttaaccaccatcaatatgagcgaataccaagagtcacatacggtg
tcgcagcttaaggggtcaccaccgggttatgtgggctatggtgagggcggtgtgttgacc
gaagcggtgcgccagcgtccttattctgtggtgctacttgatgaagtcgaaaaagcccac
ccggatgtattaaacatgttttatcaggtgtttgagctgggcatgatgcgcgacggcgaa
ggccgagaaatcgactttaaaaataccgtgatcatcatgacctctaacatcgccgctgag
caaatctctaaggcgtgccgtgcgccaaatcaagacgacgaagacgtgttagccaaagcc
atcagtgaggcgcaaggtttgttaaaccagcaagcagatgagacgccaaccgctgacgag
ggctgcgacgaagaggcgcaaacgccttggaccatgccaagcctatctgagctaaataac
ttgattaagcctgagctactgaatcattttgcgcctgcattgttggcgcgtatgcaggtg
atcccatttaagccgctagacagcgatgcactagagaatattgtcgccttaaagcttgag
aaagtggctgcacgcttaagtgagaaccatcaaattacactgcgggttgatcagagtgta
ttgagccatttatcaaagcaatgtgcgctgtctgacagcggcgctcgcttagttaatgcc
accatagaacagcagatattgccgggtgttgcccgctcaattttaggctttttgagcgaa
gaagatatgccagatctgctgactttaaccttaaatgatgacgggcaaattgaagctgta
tttgccgatctggcctaa

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