Paenibacillus sp. lzh-N1: C0638_07005
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Entry
C0638_07005 CDS
T10344
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03030
DNA replication
plzh03430
Mismatch repair
plzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0638_07005
03430 Mismatch repair
C0638_07005
03440 Homologous recombination
C0638_07005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_07005
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_07005
Enzymes [BR:
plzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0638_07005
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0638_07005
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0638_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
DnaX_C
AAA_30
TIP49
AAA_5
AAA_16
AAA_22
AAA_19
RCF1-5-like_lid
AAA_7
AAA_14
AAA_2
Rad17
nSTAND3
PIF1
AAA_assoc_2
AAA_28
Mg_chelatase
AAA_24
RNA_helicase
End3
AAA_6
DUF815
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
AUO06289
LinkDB
All DBs
Position
complement(1534391..1536142)
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICQQENIQADLDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQLIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLNPEQFKEVADAFTKEQLFAMIDTLNRYQGEMKYAVQPQTLFEVALLKLCSI
PGEAGTAAQPTAQRSGAVAGQEDVAMLKRQLAELEKKLERAMQGGLAVGAGQETLSGGRQ
ASGGRAPAPRLSAPAKLPSQLDRYIAEKSSEAFAAVGRKWSQILQGVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVSDQPAEELQLEPEHDAPGKSQEPWIDEAIQLFGEDLVVIKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatagcgttgtaccgtgcttggcggccgcaggccttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgcgaaaatcgcacgtcccatgcc
tacctgttcagtggtccgcgaggaacgggtaagaccagtgcggccaaaattttggccaag
gcaatcaactgtgagcatggacctgcaccggaaccttgcaacgaatgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgacgcagcctccaaccggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgcccacagaagtgcggcac
aaggtttatatcattgatgaagtgcacatgctgacgacggaagcgttcaatgcgctgctc
aagacgctggaagagccgccgccacacgtaatgtttatattggctacgacagagccgcat
cggattcccgcgacaattatttcgcgttgccagcgttttgacttccggcgagtatcgctg
gaggagcagacagagcggcttgacctgatatgccaacaggagaacatccaagctgatttg
gatgcactgcaatatattgcacgtctttcagatggcgggatgcgagatgcggttagcgtt
ttggatcagatatcctcgtttactgatggccgggttacgtatcagcaggtgctggatatg
acgggtgggatcgcatccgagcaattcggtaaattggccttggcattactgaaagaagat
gtaggcacagtgctccaattgatcgagaactttatgcaggaagggaaaagtgcagataag
tgtatggagaatcttctgtactatttccgagacctgctaatgatcaaaatggtgccgcag
gcgaccaaaatgacggagcgagtgctgaatccggagcagtttaaggaagtggcagatgct
tttaccaaggagcagctctttgcaatgattgacacccttaatcgttatcagggcgagatg
aaatatgcggttcagccccaaactttatttgaggtagctctattgaagttatgcagcatt
ccaggggaagcaggaactgctgctcagccgactgcacagcgctctggtgctgtagctggc
caggaagatgtggctatgttaaagcgccagcttgctgagttggaaaagaagctggaacgt
gcaatgcaaggtggcttggctgttggggcgggtcaggagacactgtcaggcggccgtcag
gcttctggtggtcgtgcccctgctccacgtctttcagcgccggctaaactcccttctcag
ttggatcgctatattgctgagaagtcaagcgaagcattcgcagcggtggggcgtaagtgg
agccagattttgcaaggggtgaaagaggcgaaagttacggttcatgcttggtttatggat
ggtgagccggtttctgtgttagaggacagtgtattggtcgcgtttaagaacaacattcat
cgtgaaactaccgaaaaacctgccaataagcaggtcatcgagaaggttttacatgagcag
ttggggcatccttatcgtttggtaacgatgatgcaaaaggattggaatgctgcgattgaa
ggagtttctgaccagcctgccgaagaattgcaactggagccggagcatgatgcgccggga
aagtcccaggagccctggattgatgaagcgattcagcttttcggggaagatctggtagtc
attaaagaataa
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