Paenibacillus sp. lzh-N1: C0638_07515
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Entry
C0638_07515 CDS
T10344
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plzh Paenibacillus sp. lzh-N1
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_07515
03036 Chromosome and associated proteins [BR:
plzh03036
]
C0638_07515
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_07515
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C0638_07515
Chromosome and associated proteins [BR:
plzh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C0638_07515
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C0638_07515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AUO06384
LinkDB
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Position
complement(1665261..1665533)
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AA seq
90 aa
AA seq
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MNKTDLINNISSKSGLSKRDVEAVLNGVLGEITDALASGDKVQLIGFGTFETRKRSSRTG
RNPQTGNTIEIPESTVPAFKAGNKLKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagatctgatcaacaatatttccagcaaaagcggtttgagcaaacgtgac
gttgaagctgtattgaatggcgttcttggtgaaattacagatgcacttgctagtggtgac
aaagtacaactaatcggctttggtactttcgaaacgcgcaaacgttccagccgtacaggt
cgcaatccacaaaccggcaacacgattgaaattccagaatcgaccgttcctgcttttaag
gctggtaataagcttaaagaagccgttaactaa
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