Paenibacillus sp. lzh-N1: C0638_07650
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Entry
C0638_07650 CDS
T10344
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03030
DNA replication
plzh03430
Mismatch repair
plzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0638_07650 (holB)
03430 Mismatch repair
C0638_07650 (holB)
03440 Homologous recombination
C0638_07650 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_07650 (holB)
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_07650 (holB)
Enzymes [BR:
plzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0638_07650 (holB)
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0638_07650 (holB)
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0638_07650 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Mg_chelatase
DUF2714
Motif
Other DBs
NCBI-ProteinID:
AUO06410
LinkDB
All DBs
Position
complement(1692387..1693382)
Genome browser
AA seq
331 aa
AA seq
DB search
MSFQHILGQDVAKKMLQSALRNHTVSHAYVFSGPQGSGQMNMAQTFAKALFCEKQTDDAC
GECLSCRKVEHGNHPDLHIVEPDGATIKIDQIRGLQRIFSYKSESSNPKVYIIRQADTMT
VQAANSLLKFLEEPQIPVVGILISENGQALLPTIQSRTQQVPFHALQPEMMMQALIGEGY
TAGLVRSVVHMASGLESCREILQQNWFAEIRNVVLQLVKESMSRGSSSIILAQQKIFKTG
LSEHLDILFHLFHLWFKDMLHFRYGRHESIVFIDHLESVSKLAITRSTEQWVSYMDLAAN
CRKKLRFHVNGQLCVEQLLIGLSDTSGSITG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccaacatatattggggcaggatgtagccaaaaaaatgctgcagagtgcattg
cggaatcacacagtcagccatgcttatgtttttagcggaccgcagggaagcggacagatg
aacatggcacagacctttgccaaggctttattctgtgagaaacagacggatgatgcatgt
ggggagtgcttgtcatgccgcaaggtagagcacgggaatcacccggacttgcacattgta
gagcctgatggggcaacgattaaaattgatcagattcgtgggcttcaacgaatattttca
tacaaatctgaaagctccaaccctaaggtatatatcattcggcaggcggataccatgaca
gtgcaagctgctaacagcctgcttaaatttttggaggagcctcagattcctgtggtcggt
atactcatttctgaaaatggacaggcgttgctgcctacgattcaatcgcggacacagcag
gtacctttccacgctttacagccggaaatgatgatgcaggcgttaattggggaaggctat
acggcaggacttgtccggtcagtggttcatatggcttccggactggaatcatgtagagaa
attctccagcagaattggtttgcagaaattagaaacgtagtgttacaattagtgaaggag
tccatgagccgggggagttcgtcgattattctggctcaacagaagatttttaaaactgga
ctttctgaacacctggatattctgtttcatctgtttcatttgtggttcaaagatatgctt
catttccgttacggaaggcacgaaagcattgttttcatagatcatttggagtccgtctcc
aaattggcaatcacccgcagcacggaacaatgggtctcttatatggatttggccgcgaat
tgcaggaagaagctccgttttcacgtcaacggacaattatgcgtggagcagcttctgatt
gggttgtccgatacaagcggttctatcaccggctaa
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