Paenibacillus sp. lzh-N1: C0638_10870
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Entry
C0638_10870 CDS
T10344
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03020
RNA polymerase
Brite
Enzymes [BR:
plzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C0638_10870 (rpoC)
Transcription machinery [BR:
plzh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C0638_10870 (rpoC)
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C0638_10870 (rpoC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AUO07015
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Position
2410696..2414310
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNQPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSAEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGSFYLTMDNKEEEGSNMILRNPNEAISAYQRGTAGLHARVAIP
VKALNKTSFTQKQQDAMLITTVGKIIFNEIFPASFPYINDATRANLLYGTAEEFFVYEKG
VNLTEAIQNAPQAGGVGKDYLGNIIARCFEIYHTTETAVILDKIKQLGFTYSTRAGVTVA
VADVVVPQEKQDILKASDDKAQVVTNQYRRGLITNEERYDRIIDIWSKAKDDITDILMKS
MDRYNSIMMMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGFTVSRIQDGKEVIEDL
YDRLEGRYCFETVRHPETGEILARRNELIDSNKAEAIVKAGVDKVQIRSVLSCRAKHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVVKEVREGKDRREIDIQGEAETKTYSVTYGSRLRVSEGMTVEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
IDAGDTTLLPGSFVDVHEYENANKIAILSGQEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVIIGKLIPAGTGMNRYRSVKFAQPEEGQSSSEELEP
ISAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaatttcgaatatatgaaaatcgggcttgcttcccccgaaaagatt
cgttcttggtcccgcggagaagtcaaaaaaccggagacgattaactatcgtacgcttaaa
ccggaaaaagaaggactattttgcgagaaaattttcggacctacgaaagattgggaatgt
cactgtggtaagtacaaacgtgtacgctataaaggtgttgtctgtgaccgctgtggagta
gaagttactcgcgctaaggttcgccgtgagcgtatgggccacattgagttggctgctcct
gtatcgcacatttggtacttcaaaggcattccgagtcgtatgggtcttgctcttgatatg
tctccaagatctttggaagagatcatttacttcgcatcttatgttgtaaccgatccagga
gatacgcctttggagaaaaagcaactcctgtccgagaaagaataccgcagctaccgtgag
aaatatggctacggattccaggcgggaatgggtgctgaagcggttaaaaagcttcttcaa
gatttagatatagacaaagaattggaattcttgaaagaagagctacgtacagctcaaggg
caacgtcgaaaccgtgcgatcaaacgccttgaagttattgaggcattccgtaactctggt
aaccaaccggattggatgatcatggacgtactgcctgttattcctcctgagcttcgtcca
atggtacagctggacggtggacgttttgctacttctgaccttaatgacctgtatcgtcgg
gttattaaccgtaataaccgtctgaaacgcttgttagatctgggtgcgccagatattatc
gtgcaaaatgaaaaacggatgctgcaggaagctgttgacgctctgattgataatggtcgt
cgtggtcgtcctgttacaggtccgggtaatcgtcctttgaaatccctcagccacatgctg
aaaggtaaacaaggacgttttcgtcaaaacttgctcgggaaacgggttgactattctggt
cgttccgttatcgtagtaggcccgtacttgaagatgtaccaatgcggtctgccgaaagaa
atggcgctggagctgttcaagccttttgttatgaaagagcttgttaacaaaggtttggca
cacaacattaagagcgcgaagcgtaaagtagagcgtgtgagtgctgaagtgtgggatgta
ctcgaagaagtaatcaaggagcatccggttcttctaaaccgtgcccctacgctgcataga
ctaggtattcaagcgtttgaaccgatcttggttgaaggtcgtgcgattcgtttgcatccg
ctcgtatgtacggcatacaatgccgactttgacggtgaccaaatggcggttcacgttccg
ctgtctgcagaggctcaagcggaagctcgtttgctcatgctggcatccggtaacattttg
aatccaaaagacggcaagcctgttgttactccttcccaggatatggtcctcggctcattc
tatttgactatggacaacaaggaagaagaaggaagtaacatgatccttcgcaacccgaat
gaggctatctcggcttaccaacgcggaacagcgggtcttcatgctcgtgtagctattccg
gttaaagctttgaataaaacgagctttacacagaagcagcaggatgcgatgttgattaca
accgtgggtaaaattatctttaatgaaattttcccagcaagcttcccgtatatcaatgac
gctactcgtgccaacctgctgtatggtactgctgaagagttctttgtttacgagaaaggt
gtaaatcttactgaagccatccagaacgctccgcaagctggtggagtgggcaaggattac
cttggtaatatcatcgcccgttgctttgagatttaccatacgacagaaaccgccgtgatt
ttggataagatcaaacagcttggctttacgtattctactcgtgcaggtgtgacggttgct
gtggcagacgtagttgtacctcaagagaaacaggatattcttaaggcatctgatgataaa
gcacaagtcgtgaccaatcagtaccgtcgtggtctgattacgaacgaggaacgctatgac
cggattattgatatttggtctaaggctaaagacgatatcacagacattttgatgaaatcc
atggatcgctacaactctatcatgatgatggttgactctaaagcgcgtggtaacaaatca
cagattacccagcttggcggtatgcgtggactgatggcgaatccatctggtcgtattatc
gagctcccaatcaaatcgaacttccgtgaaggtctgacagtactcgagtactttatctcc
actcacggagcgcgtaaaggtttggcggatacagccttacgtacggctgactctggttac
ctaactcgtcgtctcgttgatgtggcgcaggatgttatcgtgcgcgaagatgactgcgga
acggataaaggctttacagtaagtcgcatccaggatggtaaagaagtcattgaggacctg
tacgatcgtctggaaggtcgctattgcttcgaaaccgtacgtcatcctgaaacgggtgaa
atcttggctagacgcaacgaactgattgactccaacaaagctgaagcgatcgttaaagct
ggtgtggataaagttcaaattcgttccgtactaagctgccgtgctaaacatggcgtctgc
aaaaaatgttacggccgtaatctggctactggcaagcacgttgagattggtgaagcggtt
ggtattatcgcggctcaatccatcggtgaaccagggacacagctcaccatgcgtacgttc
cacacaggtggtgtagcgggcgacgatatcacccaaggtttgccacgtatccaggagctt
tttgaagcgcgtaatcctaaaggtcaggcaaccatcagtgaaattgacggtgtagttaaa
gaggttcgtgaagggaaagaccgtcgcgaaatcgacattcagggtgaagctgaaacaaaa
acctattcggtcacttatggttcacgtctgcgcgtaagcgaaggcatgactgtggaagcc
ggggacgaactgacggatggttcgattgaccctaaagaaatgctgcgtattaaaggtatt
cgcggggtgcagaactatatccttcaggaagttcaacgtgtataccggaaccagggtgta
gaaatcaacgacaagcacgtagaagttatgattcgtcaaatgttgcgtaaaattcgtatc
attgatgcgggcgacacgacactgcttccaggttcatttgttgatgtgcatgagtatgaa
aatgcaaacaagatagcaattctcagcggccaagaaccagcggtagccaaaccagttctt
cttggtatcaccaaggcgtctttggaaactgactccttcttgtcagcagcttccttccag
gaaactactcgtgtcctgacagatgcagctatcaaaggaaaagtcgatcagttgcttgga
ttgaaagagaatgtaattatcggtaaattgatccctgcgggaacaggtatgaaccgttac
cgtagcgtgaaatttgcccagcctgaagaggggcaatcctcatctgaggagctcgaaccc
atttcagctgagtag
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integrated database retrieval system
