Paenibacillus sp. lzh-N1: C0638_16305
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Entry
C0638_16305 CDS
T10344
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03030
DNA replication
plzh03430
Mismatch repair
plzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0638_16305
03430 Mismatch repair
C0638_16305
03440 Homologous recombination
C0638_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_16305
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_16305
Enzymes [BR:
plzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0638_16305
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0638_16305
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0638_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
TcaA_5th
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AUO07984
LinkDB
All DBs
Position
3569812..3570843
Genome browser
AA seq
343 aa
AA seq
DB search
MDVKTASRAIRKGDISPVYLLYGSEKYQMKQFVDMLKEKVVEEEHRDFAIISYDLTETPI
EVVVEDAETAPFLVPKKLIIVRDTSVFAAGKDNGKIEHRLETLLTYMDNPTDYSVIVFTV
QAEKLDERKKIVKKLKSDASVIAFAPMGGDDLVAWVHKRAAEREVQLAAGAAERLIQYTG
TGLQSLAAEIDKLCLYAGAQGTISSADIESLVPRNTEQNVFAMVEDLANLRLDKALSIFY
ELLKQKEEPIKIAALITRQFRIMLQVKELAGQSYSQQQIASQLSLHPYGVKVAGDQARRF
RPEQLRQLLYELGELDYHMKTGVVDKVLGLELFLMKMGAGASI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaaacagcctctagggctattcgcaaaggtgatatttcgccagtgtatctg
ctatatggcagtgaaaaatatcaaatgaagcagtttgttgatatgctaaaagagaaggtg
gtggaggaggagcatcgtgacttcgccattatttcttatgatttaaccgagacgccaatt
gaggtggttgtggaggatgcggagacagcgccttttctggtgccgaaaaagctaattatt
gtacgggataccagtgtatttgcagcagggaaagataatggaaaaatagagcaccgtctt
gagactctgttgacttatatggataacccgactgactatagcgtcatcgtttttacggtt
caggctgaaaaactggacgaacggaaaaagatcgtcaagaaactgaaaagtgatgcctca
gttattgctttcgctcctatgggtggagatgatcttgtagcttgggtccataagcgtgca
gcagaaagagaagtgcagttggcagcaggagcggctgagagactcattcaatacacgggt
accgggcttcaatccttggctgccgagatagataagctgtgcttatacgcaggagcgcag
ggaacgatctcatccgctgacattgaatcccttgtgcctcgtaatacagagcaaaacgta
tttgcgatggttgaggatctggctaatttgcggctggataaggcgctcagtattttttat
gaattgcttaagcaaaaagaggaaccaatcaagattgcagctttgatcacacggcagttt
cgtattatgttgcaggtcaaagagctggcaggtcaaagctattctcagcaacaaattgcg
agtcagctcagcttgcatccttatggggtgaaagttgcaggggatcaagcgcgacgcttc
cgtcctgagcagctgcgccagcttctctatgaactgggcgagctggactaccatatgaaa
acaggtgttgttgacaaggtgctgggactcgaactatttttgatgaaaatgggagcaggt
gcttcaatctaa
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