Paenibacillus sp. lzh-N1: C0638_16640
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Entry
C0638_16640 CDS
T10344
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh00730
Thiamine metabolism
plzh01100
Metabolic pathways
plzh01240
Biosynthesis of cofactors
plzh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C0638_16640
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C0638_16640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plzh03016
]
C0638_16640
Enzymes [BR:
plzh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C0638_16640
Transfer RNA biogenesis [BR:
plzh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C0638_16640
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiI
ThiI_fer
THUMP
QueC
ATP_bind_3
DUF2090
Motif
Other DBs
NCBI-ProteinID:
AUO08048
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Position
3647615..3648841
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AA seq
408 aa
AA seq
DB search
MHYDMLLLRFGEFTLKGKNRARFEKAVLKHVKLLLKPFPGASLRKEFGRIYVVLGGEPYE
QIIQVLQKVFGITTISPVKMAPVELDAIIETAVALMHELNVDEGTTFKVNARRVWKEFPH
SSQELNHLIGSPILRTFQALKVDVRQPDIELRVEVREQAAYIFSDVIMAVGGFPLGTNGK
AMLLLSGGIDSPVAGWSSMRRGLEIECVHFYSYPFTSERAKEKVVDLAKVLAGYAGRIKI
HLVPFTEVQTAFTRTGQDNLIITLMRRSMLRIATMLAEREGALALVTGDSLGQVASQTLS
SMNVIGRSTELPLLRPLVMMDKQEITEIAKQIGTYDLSILPYEDCCTLFVPKSPTTNPNL
WVVQKIEASIRDLNALIDQAVATTETVVLEAGGAVEGRKEEVIQEDWF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgatatgcttttacttcgcttcggcgaatttacattaaaagggaagaatcgc
gctcgttttgagaaggctgtactgaaacacgtaaagctgctgcttaagccttttccaggt
gcttcgttgcgcaaggaatttggacggatttatgtagttctcggaggagagccttatgaa
cagatcattcaagtgttgcaaaaggtgtttggcatcacgacgattagtcctgtcaaaatg
gctcctgttgagctggatgctatcattgagacggctgtagctttaatgcatgagctgaac
gtagacgagggaacgacattcaaggtaaatgcccgcagggtatggaaggaattcccccat
tcttcacaagagttgaatcatttaattggttctcctattttgcggacgtttcaggcattg
aaggtcgacgtgcgtcaacctgatattgagctacgtgtggaggtaagagagcaggcggca
tatatttttagtgatgttattatggctgtagggggctttccgttaggaaccaacggcaaa
gctatgctgctgctgtccggtggaattgacagtccggtagcaggatggtcatccatgcgc
agaggcttggaaatcgaatgtgtacatttttatagctatccgtttacaagtgagcgtgcg
aaagagaaggttgttgatttggcaaaagtattagcaggctatgcaggccgaatcaaaatc
cacctcgtaccgtttacagaggtgcagacggcttttacacgcactgggcaggataattta
attatcacgctaatgagacggtccatgctgcgaattgcaacgatgctggcagagcgtgaa
ggagcgctggcactcgtgacgggcgacagtctgggccaagttgctagtcaaacgctatcc
agcatgaatgtgattggtcgctcaacggaactccccttgctgcgacctctcgttatgatg
gataagcaggagattacagaaatcgctaagcaaattggcacctacgatttatccattctc
ccgtatgaggattgttgtacattgtttgttcccaaatctcccacgaccaatccgaatttg
tgggtagttcagaagattgaagcttctattcgggatttaaatgctttgatcgatcaggct
gtagctacaacggagacggttgtccttgaggcaggtggagctgtagaggggcgtaaagag
gaagttatacaggaagattggttttaa
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