Paenibacillus sp. lzh-N1: C0638_17515
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Entry
C0638_17515 CDS
T10344
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03022
Basal transcription factors
plzh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C0638_17515
09124 Replication and repair
03420 Nucleotide excision repair
C0638_17515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plzh03021
]
C0638_17515
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_17515
Enzymes [BR:
plzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0638_17515
Transcription machinery [BR:
plzh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C0638_17515
DNA repair and recombination proteins [BR:
plzh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C0638_17515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUO08213
LinkDB
All DBs
Position
3887083..3888906
Genome browser
AA seq
607 aa
AA seq
DB search
MNPDHPCIVQRDFTVLLEMGLPDSEWARSQLQIYAELVKSPSAFHTYHITPLSLWNAAAL
GWSAEDIQNSLHSMSRWDIPRDLLKDIEQLVSRYGTLTLSRASAKEEQTYGTDTIDAHRD
EQESDRDTKARKANTYTIGDHLILAVETPTLLDELLNKKELKQLGLLRTNETSASVPPEN
RGLLKQELTRLGYPVVDTAGYLEGNLLRFTLGKGQTELQLRDYQVKAADAFEGADGLGGS
GVLVLPCGAGKTVIGMAVMNRLQCEVLILTSNTISVRQWIEELKQKTNIPVDSIGEYSGQ
KKEVRPITVATYQILTHRRTKDGEFEHMKLLSERKWGLIIYDEVHLLPAPVFRATADIQA
TRRLGLTATLVREDGCERDVFSLIGPKRYDMPWKELERQGWIAQVDCVELRLPMTADLLE
QSMRAEGRQQYRIAAENPAKMEAVRSLVEKHKGIPTLIIGQYLDQLRKLAQELDVPLITG
SMTQSERVRWFDAFRKGNIQTLLVSKVANFAVDLPDAAVAIEVSGSFGSRQEEAQRLGRI
LRPKPGDNKAYFYALVTENSRETDFAARRQLFLIEQGYEYAIRRFDGTMAGRSQEDEIED
GGKKKEA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagatcatccttgtattgtacaacgtgattttaccgttttgctggaaatgggt
ttgcctgattcggaatgggctcgttcacagttgcagatttatgcggagctggtaaaaagt
ccgtccgcttttcatacatatcacatcactccattgtcgctctggaacgcagccgctctc
gggtggagtgctgaggacattcaaaatagtttgcactctatgtcccgttgggatattccg
cgtgatttgttgaaggatattgaacagcttgtttctcgttatgggacgttgacgctgtca
cgggcgagtgcaaaagaagaacaaacttacggcacagatacgattgacgcgcatcgtgat
gagcaagagtcagacagagatacaaaggctaggaaagccaacacatacacaataggtgat
cacttgatcttggcagtagagactccaactttactggatgagttattgaacaagaaagag
ctaaaacagcttggtttgcttcgcaccaatgagacaagcgcatccgtaccgcccgaaaat
cgtggcttgctcaagcaggaattaactcgcttgggatatcccgttgtggatacggcaggt
tatcttgaggggaatctgcttcgttttaccttggggaagggacaaacggagttgcagctt
cgtgattaccaggtgaaagctgctgatgcatttgaaggcgcagacggcttaggggggagt
ggtgtactagtgctcccatgcggagccggaaaaacagtgatcggtatggcagtgatgaat
cgacttcagtgcgaggtgcttattttaacttctaatactatttctgtgcggcaatggatc
gaggaactgaagcaaaagacaaatattcctgtcgattctattggggaatacagtggtcag
aaaaaggaggtgcgaccgataacggtggcaacctaccagattttgacgcatcggcgcacc
aaagacggagagtttgaacatatgaaactgctgagtgagcggaagtggggactcattata
tatgatgaggtacatttgctgcctgcgccagtatttcgagccacggccgatattcaggct
acccgtcgtttgggattaacagctacgttagttcgagaggatgggtgtgagcgggatgtg
ttctctttaattggacccaaacggtacgatatgccgtggaaggaactggagcgacagggc
tggattgctcaggtcgattgtgtagaactgcgtttgcccatgaccgctgaccttttggag
caaagtatgcgtgctgaaggcagacagcaataccgaattgcagccgaaaatccggctaag
atggaggcagtacgcagtctggtggagaaacacaaggggataccaacacttattattggt
caatatttagaccagttacgtaaattggctcaggagctggacgtcccactgattacgggt
tccatgactcagagcgagcgggtgcgttggttcgatgcgtttcgcaagggtaatattcaa
accttattagtatccaaggtagcaaactttgcagtcgatttgccggatgcagcagtagcg
atagaggtatcgggcagctttggctcccgtcaggaagaggcgcagcgacttggccgcatt
ttacgaccaaagccaggcgacaataaagcttatttttatgcattagtgacggagaacagt
agagagacggattttgcagcacgtcgtcagctgtttctgattgaacagggctatgaatat
gcgattcgcaggtttgatgggacgatggctggcagaagccaggaggatgagattgaagat
ggcggaaagaaaaaggaggcctaa
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