Paenibacillus sp. lzh-N1: C0638_18350
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Entry
C0638_18350 CDS
T10344
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
plzh Paenibacillus sp. lzh-N1
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plzh03009
]
C0638_18350
Ribosome biogenesis [BR:
plzh03009
]
Prokaryotic type
GTPases
C0638_18350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
ABC_tran
cobW
MMR_HSR1_Xtn
Nuc_deoxyri_tr2
Ras
SRPRB
NTPase_1
ATPase_2
HP1_ORF34
Motif
Other DBs
NCBI-ProteinID:
AUO08375
LinkDB
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Position
4059491..4060813
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AA seq
440 aa
AA seq
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MARPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGG
IEIDGEDVILKSIRMQAELAIEEADVIVFMSDAKAGITQADEEVAQMLYRSGKPIIVAVN
KVDNLSRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAITSNLPELEEDHYDEDVIRVA
LIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGMRKRGKV
YETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFVVNKWDVV
DKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVMRIQTHLL
NDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERYLENKIRA
AFNFEGTPIRIFTRRKSDES
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacccgttgtggctatcgttggtcgtccgaatgtgggtaagtccacgattttt
aatcggattatcggggatcgtttgtccatcgtggaagataaaccgggaatcactcgtgac
cgtatttacggtatatcggagtggaatggtaaatccttcagtattattgacaccggcggc
attgagattgatggtgaggatgttatcttgaagtccatccgtatgcaggccgaacttgca
atagaagaagcagatgttattgtgttcatgagcgatgcaaaagcaggaataacgcaagcg
gatgaagaggtagctcaaatgctatatcgttcgggtaaaccgatcatcgtagcagtaaac
aaggtggacaacctcagtcgcgccgatctgatctatgagttttattcttatggatttggt
gatccaattgctgtttctggtagtcatggcacagggatcggtgatttgttggatgcaatt
acgtccaatttacctgagctagaagaagatcattatgacgaagacgttatacgtgtcgct
ttgatcggacgtccgaatgtaggtaaatcttcactcgttaatgccattttaggagaagaa
cgggttattgtcagtgacattgcaggtacaacacgtgatgcaattgacacgccttttgaa
aaagacggacaaaagtatgtactgattgatacggcaggtatgcgcaaacgtggtaaagta
tacgaaacgacagaaaaatatagtgtaatgcgtgcgatgcgtgccattgagcgtgcagat
gttgtactggtcgttattaacggcgaggaaggcatcattgagcaggataaacacattgca
ggctatgcttatgaagcgggtaaagcctcgttgtttgtcgttaataaatgggatgtcgta
gataaagacgataaaacgatgcaccagtttgagacgaaaatccgtgaccactttctgttc
atgacctatgctccgattgtgttcttatctgcaaagacaaagcaacgtctgcaaaagttg
cttccagttgtgcagcatgtggcacagcagcatgtcatgcgtattcagacacatctgctg
aatgatgtcatttccgacgcggttgccatcaatccaccaccaacagataagggccgtcgt
ctgcgtattaactatgtgactcaggttgctgttaaaccgcctacgatggttgtattcgta
aatgatccagagataatgcacttctcttacgagcgttatctggagaacaaaattcgcgcc
gcctttaattttgaaggaactccaattcgtatatttacccggcgcaagtctgacgaaagt
tag
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