Paenibacillus sp. lzh-N1: C0638_18400
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Entry
C0638_18400 CDS
T10344
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plzh Paenibacillus sp. lzh-N1
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_18400
03036 Chromosome and associated proteins [BR:
plzh03036
]
C0638_18400
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_18400
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C0638_18400
Chromosome and associated proteins [BR:
plzh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C0638_18400
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C0638_18400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
SIS_2
DUF937
Motif
Other DBs
NCBI-ProteinID:
AUO09672
LinkDB
All DBs
Position
4070182..4070454
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AA seq
90 aa
AA seq
DB search
MNKTDLINQVSESTELSKKDVTKAIDAVFEAIAGALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaacggatttgatcaatcaggtttctgagagcactgaattgtccaaaaaggac
gtaaccaaagcaatcgatgcagtatttgaggcgatcgctggtgcactgcaaaacggagac
aaggtacaactggtaggtttcgggaactttgaggttcgtgaacgttccgcacgtaaagga
cgtaacccgcaaacaggagaagaaatcgaaatccctgcgagcaaaattccggcattcaaa
ccgggtaaagcgctcaaagacggaattaaataa
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