KEGG   Paenibacillus sp. lzh-N1: C0638_18400
Entry
C0638_18400       CDS       T10344                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
plzh  Paenibacillus sp. lzh-N1
Brite
KEGG Orthology (KO) [BR:plzh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plzh03032]
    C0638_18400
   03036 Chromosome and associated proteins [BR:plzh03036]
    C0638_18400
   03400 DNA repair and recombination proteins [BR:plzh03400]
    C0638_18400
DNA replication proteins [BR:plzh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    C0638_18400
Chromosome and associated proteins [BR:plzh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    C0638_18400
DNA repair and recombination proteins [BR:plzh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      C0638_18400
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-DNA_bdg DUF2267 SIS_2 DUF937
Other DBs
NCBI-ProteinID: AUO09672
LinkDB
Position
4070182..4070454
AA seq 90 aa
MNKTDLINQVSESTELSKKDVTKAIDAVFEAIAGALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq 273 nt   +upstreamnt  +downstreamnt
ttgaataaaacggatttgatcaatcaggtttctgagagcactgaattgtccaaaaaggac
gtaaccaaagcaatcgatgcagtatttgaggcgatcgctggtgcactgcaaaacggagac
aaggtacaactggtaggtttcgggaactttgaggttcgtgaacgttccgcacgtaaagga
cgtaacccgcaaacaggagaagaaatcgaaatccctgcgagcaaaattccggcattcaaa
ccgggtaaagcgctcaaagacggaattaaataa

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