Paenibacillus sp. lzh-N1: C0638_22965 Help Entry C0638_22965       CDS       T10344                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism plzh  Paenibacillus sp. lzh-N1 Pathway plzh03018   RNA degradation Brite KEGG Orthology (KO) [BR:plzh00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     C0638_22965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:plzh03019]     C0638_22965 Messenger RNA biogenesis [BR:plzh03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      C0638_22965 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 PEP_mutase AP_endonuc_2 Motif Other DBs NCBI-ProteinID:  AUO09183 LinkDB All DBs Position complement(5213191..5214870) Genome browser AA seq 559 aa AA seqDB search MSKKTNNDKLMIFALGGVGEIGKNMYVVQYGNDIVVVDSGLKFPEEDMLGIDIVIPDISY LTENRDKVRGIVLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVENKLKEANLLGETKR ILINADSEIKLGSTLKVTFFKTNHSIPDSVGVCIDTPEGAVVHTGDFKFDHTPVNGQYAD LQRMAEIGTRGVLALLSDSTNAEKPGFTPSEKSVGIVLEDIFRKSRQRVVVATFASNVHR IQQVINAAEATGRKVTVIGRSMVNVVGIASDLGYLEIPDGMLIEPEEVGKMSADRVVILC TGSQGEPMSALTRMARSTHRKVDILPGDSVIIAATPVPGNEKYVGRTIDELFRLGANVYY SAANPGIHVSGHGSQEELKLMLNLMKPKFFLPIHGEFRMQRRHALLAEGVGIEPENIFIT DIGEVIEIQNGGARRAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ DGTIKSGPDIISRGFVYVRESEGLLDEANRIVSSTLHKLMSENVNEWASLKTNVKDALGR FLYEQTRRRPMILPIIMEV NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt ttgtctaaaaaaacaaacaacgataaattgatgattttcgctttgggcggcgtcggtgaa atcgggaaaaatatgtatgtcgttcaatacggcaacgacattgtcgtggtggattccggt ctgaaatttccggaagaggacatgcttggcatcgatatcgttattcctgatatttcctac cttacagagaaccgcgacaaagtaagaggcattgtgttgactcatggtcacgaggaccat atcggcggtttgccttacgtgctgaaacatttgaatgtacctgtatatggtaccaagttg acgctgggactggtggaaaacaagctgaaggaagcgaatctgcttggtgaaaccaaacgc attttgatcaatgctgattccgaaatcaagctgggctccacattgaaagtaacattcttc aaaaccaaccatagtattcctgattctgtaggtgtttgcattgatactcctgaaggcgct gttgttcatacaggagacttcaaatttgatcatactccggtgaacggacaatatgcagat ttgcagcgtatggctgagattggcacacgtggcgtactggctctattgtcagacagtact aatgccgaaaaaccgggctttacaccttcggaaaagagcgttggcattgtgctggaagat attttccgcaagtcgagacagcgtgtggtcgtagccacttttgcttcgaacgtacatcgc attcagcaggtcattaatgctgctgaggcaactggacgtaaagtaacggttattggtcgc agcatggttaatgtcgtaggtattgcttctgatttgggctacttggaaatcccagatgga atgctgattgagcctgaagaagttggcaaaatgtcagcggatcgcgtagttattctctgc acaggtagtcagggtgaaccaatgtctgctttgacaagaatggctcgttctacgcatcgt aaggtagatatccttccaggggactcagtgatcatcgcagctactccggtaccaggtaat gaaaaatatgttggacgcactattgatgagctgttccgtttgggtgccaatgtatactac agtgcagctaatcctggtatccacgtttctggacacggcagccaggaagaactcaagctg atgctgaatctgatgaaaccaaaattcttcttgccaattcacggtgagttcagaatgcag cgtcgtcacgctctgcttgctgaaggagtaggtatcgagcctgaaaatatctttatcacg gatatcggtgaagtcattgaaattcagaatggtggagcacgtagagctggtaaagttaca gcaggtaacgtactgattgatggactaggcgtaggagatgtaggaaatatcgtgttgcgc gaccgcaaattattgtcacaggacggtattttggtagtggttgtcacactgagcaagcaa gatggcacgattaagtcgggcccggatatcatttcccgtggtttcgtgtatgttcgtgaa tcagaaggtttgctggatgaagcaaatcgtattgtttcaagtacactgcataagctcatg agtgaaaatgtaaatgaatgggcttccctcaagacaaatgtcaaggatgcactgggtcgc ttcttgtatgagcaaactcgtcgcagaccgatgattctgccaattataatggaagtgtga

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