Paenibacillus sp. lzh-N1: C0638_23455
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Entry
C0638_23455 CDS
T10344
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
plzh Paenibacillus sp. lzh-N1
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plzh03036
]
C0638_23455 (smc)
Chromosome and associated proteins [BR:
plzh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
C0638_23455 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
CCDC39
AAA_23
AAA_29
UVR
Motif
Other DBs
NCBI-ProteinID:
AUO09277
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Position
complement(5308589..5312158)
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AA seq
1189 aa
AA seq
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MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGK
MEDIIFAGSDARKAVNYGEVSLTLDNEDQALPLDFGEVTVTRRVHRSGDSEYFINRQSCR
LRDITELFMDTGIGKEAYSIIGQGRIEEILSTRSEDRRGIFEEASGIVKYKSRKKDAVRK
LDETEQNLLRIHDLVSELEDQIGPLKEQSEKAIHFKELRSELKSKEISMYVHQIEQIHTS
WSDATSKLALLQQEQLQLSTVVSRHDAMLENDRNELRQLEEQVERLQKDLLQYSEATEKS
EGYGELLKERTRNLEANREQLILSLSTSESRHSERKSELDQLNEKLSALNVELDELRARL
SDEEAKLIGVTGGISQEQEESLKGGLLELMNQMAQARNEIRYTDQQKEALERRVNRVSDE
SGKWEAQKVELEQRKKGLEATIQKLGQEISSLRSGYIQGSEQYQALQKLLEENQGTVRKW
EQKREAQISRRDTMKEMQDDFDGFMLGVKEVLKASRKGTLHGVHGAVAELIRVPEHLEQA
METALGASVQHIVMENESVSRQAISFLKQRQLGRATFLPMDVIRPRQIGAGERQIVESAE
GFVGIGADLVQYDDRYAGIVGSLLGNVVIARTLEDANRIAARCQYRYRVVTLEGDVVNAG
GSMTGGSQFKKNANLLGRKRQLDQLDQDILDTEQQIARLRQSAIDTKRQLEETQTRLDEL
RQGGDVKRTEEQQMAMELKQLEHELRHVLEQVAASGQEKKGFDQEIKELEASRAEALVKL
AALEEEEKKTHQAIHAAEFARKANESAKEQLQGELTNLKVREGKLDQERFSLEEQIRRLR
GDYDTLGKDSRQNKTLLASIEADLLTNEQETVKQIENLNQYRLKKEEAAEQLEFKRAARS
SLSKKLEAAENDTKEQRIQLKSVEELLRQTEIGVNRLDVELENVLKKLSDDYELSYELAK
QRYPIPEDIEGTQSEVERLKRGISALGEVNLGAIEEYQRVHERYTFLDEQKSDLVEAKTT
LYQVIREMDDEMSKRFKTTFDAIRREFGTVFSKLFGGGRADLVLLDPERLLETGIDIVAQ
PPGKKLQNLQLLSGGERALTAMALLFAILHVKPVPFCVLDEVEAALDEANVVRFAQYLRE
FSEQTQFIVVTHRKGTMEESDVLYGVTMEEGGVSKLVSVKLDNDEAEIA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaagcgcattgagctggcgggcttcaaatcgtttgcagataaaacggaaatg
gaatttgtccgcggcattacggcagtcgtcggacccaatgggagtggaaaaagtaatatt
tccgacggaattcgttgggtgttgggcgaacagagtgccaaatcactgcgtggcggcaag
atggaggacattatttttgcaggtagtgatgctcgtaaggctgttaattacggtgaagta
tcacttacgctagataatgaagatcaggcattgcctctggattttggtgaagtgacggta
acgcgacgtgtgcatcggagtggggatagtgaatatttcattaatcgtcaatcatgcaga
cttcgggatattactgagctgtttatggatacagggattggtaaagaagcttattcgatt
attgggcaaggacgtattgaagaaattttgagtacccgatctgaggatcgacggggtatt
tttgaggaagcctcgggtatcgtaaaatataaatcacgtaaaaaagatgcagttcgcaag
ctggatgaaacagagcaaaatttgctgcgcattcacgatttggtcagtgaactagaggat
cagattggacctcttaaggagcagtctgaaaaggcgattcattttaaagagctgcgcagt
gaattaaaatcaaaagaaatttcgatgtacgtccatcaaattgaacaaattcatacttcg
tggagcgatgcgacttccaaactagctttgttgcagcaagagcagcttcagttgtctaca
gtagtgtcccgccatgatgcaatgctggaaaacgatcgtaatgaattacggcagctggaa
gagcaagtagaacgtctgcaaaaggatctgctgcaatacagtgaagctacggaaaaaagt
gaaggatacggtgaattgctcaaagagcgcacacgcaatttggaggccaatcgggaacaa
ttgatcttatccctcagcacaagtgaatcacggcattccgaacgcaaaagcgaactggat
cagctgaacgaaaagctgtcagcgctgaatgtagagctggacgagttgcgtgcgcgtctg
tctgatgaagaggccaaactgattggcgtcacaggtggaatcagccaggagcaggaagaa
agcctaaagggtggtctgctggagctgatgaatcagatggcgcaggcgcgtaacgaaatt
cgttataccgaccaacagaaggaagcgttggaacgccgagtgaatcgcgtcagtgatgaa
tccggcaaatgggaagcccaaaaagtcgaacttgaacagcgcaaaaaagggttggaagcg
acgattcagaagctgggacaggaaattagcagtttgcgcagtggctatattcagggaagt
gaacagtaccaggccctgcaaaaactactggaagaaaaccagggcacggttcgtaaatgg
gaacaaaaacgtgaggctcaaatttcacggcgagatacgatgaaagaaatgcaggatgac
tttgacggcttcatgctcggagttaaagaggtgttaaaggcttcacgcaaaggaactttg
cacggtgtgcatggagcagtagcggagctgattcgggtacctgagcatttagagcaggcg
atggaaaccgctttgggcgcttcagttcagcatattgtgatggaaaatgaatcggtatcc
agacaggcgatcagttttctaaagcaacgtcaattgggcagagcgacattcttgcctatg
gacgttatccgcccgcgtcagattggtgctggagaacgtcaaattgtggaaagcgcagaa
ggctttgtcgggatcggtgcagatcttgttcagtacgatgatcgatatgccggaatcgta
ggcagtctcttggggaatgtggtcattgcccgtacgctggaagatgccaatcgtattgcg
gcccgttgtcaatatagatatcgtgttgtcacgctggaaggcgatgttgtcaatgcaggt
ggttccatgactggggggagccagttcaagaaaaatgctaatctgctgggccgtaaacgt
cagctggatcagttggatcaagacattctagacacggaacagcaaattgccaggttgcgc
cagagtgcaatagataccaaacgacagttggaggagacacagacccgtctggatgaattg
cgccagggcggcgatgtgaagcggaccgaagagcagcagatggcaatggagctcaaacaa
cttgagcatgaacttcgtcatgttctggagcaggtagctgcgtctggccaggagaaaaaa
ggctttgaccaggaaatcaaggagttggaagcttcccgtgcagaagcactggtaaagttg
gctgcgctggaggaagaagagaagaaaacgcatcaagccattcacgctgccgaatttgcg
cgtaaagcgaatgaatcagccaaagagcagttgcaaggagagctcaccaatctcaaggta
agagaaggcaagctggaccaagagcgcttttcattggaagagcagattcgcagattgcgt
ggggattatgatacccttggtaaggattcaagacaaaacaagaccttgcttgcttccatc
gaagcggatttgcttaccaatgagcaggagaccgtgaaacaaattgagaatctcaatcaa
taccgtttgaaaaaggaagaagctgcagagcaattggaattcaaacgggctgcacgcagc
agcttgtccaaaaaactggaagctgctgagaatgacacaaaagaacagcgaattcagctt
aagtcggtggaggaactgcttcgccaaacagaaattggagtaaaccgacttgatgtggaa
ctggaaaatgttttgaaaaaattaagtgatgattatgaactcagctatgagctggccaag
cagcgttaccctataccggaagatattgaaggtacgcagagtgaggtggaaaggctcaaa
cgcgggatatctgcgctgggtgaggtcaatctgggtgctattgaggaataccagcgtgta
catgagcgctatacgtttcttgatgagcaaaagtctgatttggtagaggccaagacaacg
ctctatcaggttattcgtgaaatggatgatgaaatgtccaagcgcttcaagaccacgttc
gatgcgattcgtcgcgaatttggaacggttttctccaagctgttcggaggcggacgtgca
gaccttgtgttgcttgatccggaacgtttgctggagacgggcattgacattgtagctcag
cctccaggcaaaaaacttcaaaacttacagttgttgtcaggcggtgaacgggctctaaca
gcaatggctttattatttgccattttacacgttaaacctgttccattctgtgtactcgat
gaagtagaggcagcattagacgaagcaaatgtggtgcgttttgctcagtatttacgggaa
ttctcagagcagacacagtttatcgtagttacacaccgtaaaggcaccatggaagaatcc
gatgtgctgtacggggttacgatggaagaaggcggggtttctaaactcgtatctgtcaag
ctggacaacgatgaagctgagattgcctga
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