Paenibacillus sp. lzh-N1: C0638_23790
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Entry
C0638_23790 CDS
T10344
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03420
Nucleotide excision repair
plzh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0638_23790
03430 Mismatch repair
C0638_23790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_23790
Enzymes [BR:
plzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0638_23790
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0638_23790
MMR (mismatch excision repair)
Other MMR factors
C0638_23790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_16
AAA_30
SLFN-g3_helicase
DEAD
NACHT
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUO09708
LinkDB
All DBs
Position
complement(5382407..5384761)
Genome browser
AA seq
784 aa
AA seq
DB search
MTTEQQWNEEQRRVEDVTAVISGRIRKLETEVGSVRGDVVDMRKDFWDEVTINFSEADDV
GETSTSLRQQSEILSERERRHKHSTEALGRLKKLLDSPYFARIDFAEEGQTAERIYLGIA
SLLDNQDEEFLIYDWRAPISNLYYDNMPGPASYKTPAGEMEGELTLKRQFSIRDGQIRFM
FDTGVTIGDELLQAVLSRSSDAQMKSIVATIQKEQNRIIRDDRSRMLIVQGAAGSGKTSA
ALQRVAYLLYKYRDRLRADQVVLFSPNPMFNSYVSTVLPELGEENMLQATFQEYLERRLG
REFQLEDPFEQLEYVLSASSQPGYEARMEGIRFKSSKTFLHVITGYKAHLEQEGMRFKPV
RFQGREVISVEQMASKFYEFDSAVRLANRLELLRDWMLKELARFGKEECSAPWVDQQMDL
MEPEDYQRAYNRMRRKSKNKGDTFDDFTREREILARMVVSDRLKPLRKWIKALRFVDTTR
LYSELFMNETLLSQLSNHAELPVNWSEISRQTLKRIQAGELAYEDVTPFLYLRELMLGFR
SNSNIRHVFIDEAQDYSPFQLAFFKRLFPQAKMTALGDFNQAIYAHASVLQDAEPLYDLY
GADQTEMISLTRSYRSTQEIVEFTRGMVAGGEHIVPFNRKGEKPLVTEVNSREKLHQLIA
GNVTKLLAEGYESIAVICKNADESAAAYEALEGQLPVKPKLIKKTTPAFEKGIHIIPAYL
AKGVEFDAVLIYDGSVQEYQRESERKLFYTACTRAMHLLHIYSIGEITPFVSSQESETYI
RKVE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgactactgagcagcaatggaatgaggaacaacgaagagtagaagatgtgaccgcagtc
attagcggacgtattcggaagctggagacagaggttggttctgtgcgcggcgatgtcgtc
gatatgcgtaaagacttctgggatgaggtaacgatcaatttcagtgaggcggatgatgtg
ggtgagacgtccaccagtttgcgtcagcagtctgagattttgtctgagcgggaacgaaga
cacaagcattccactgaggcgctaggtcgtttgaaaaagttgctggactcaccctatttt
gcacgcattgattttgctgaggaagggcagactgcggagcgtatttatctgggcattgcc
tccctgctggataatcaggatgaggaatttctgatctacgactggcgtgcgcctatttcg
aatctttattacgataacatgccaggtcccgcttcttataagaccccagcaggagagatg
gaaggagaactgacgctcaaacgccaattctcaatccgtgacggacagattcgctttatg
ttcgatacaggcgtcaccattggagacgaactccttcaagccgtattaagccggagctcg
gatgctcaaatgaaaagtattgtcgctaccattcaaaaggagcagaatcgcatcatccgt
gatgaccgaagccgcatgcttattgttcagggagcggcaggaagcggcaaaacctctgca
gcgcttcagagagtagcgtatttgctgtataagtatcgggatcgcttgcgagcggatcag
gtcgtgttattttcgccaaaccccatgtttaacagttatgtttcgacggtattgcctgaa
ttgggtgaggaaaatatgcttcaggccacgtttcaggaatatttggaacggcgtttgggc
cgggagtttcagttagaagatccttttgagcagctggaatatgtgctatcagcgtcgtca
cagcctgggtatgaagctaggatggaaggtatccgttttaagtcatccaagacgttctta
catgtgattacaggctacaaggcgcatctggaacaggagggaatgcgttttaaacctgtt
cgttttcagggacgtgaggtgatttcagtagagcaaatggcaagcaagttttatgaattc
gactcggctgtgcggctggcgaaccgattggaactgctacgcgattggatgctcaaagag
ctggcccgctttggtaaggaagaatgctccgctccttgggtggaccagcagatggatctg
atggagccggaggattatcagcgtgcatataaccgcatgcgccgtaaatccaagaataaa
ggcgataccttcgacgactttacacgtgaaagagaaatattggcacgtatggtggtcagt
gaccgcttaaagcccttgcgcaagtggattaaggcactccgcttcgtggatacaacccgt
ctatacagcgagttgtttatgaacgagacgttattaagccaactgtcgaatcatgcagag
ctacccgtcaactggagtgaaattagtcggcaaactctgaaacgaattcaggctggagaa
ttagcgtatgaggatgtgacgccctttttatatttgcgtgagctgatgctgggcttccgt
tccaatagtaacatccgtcatgtgtttattgatgaggcacaggactattcaccattccag
ctggctttctttaaacgattatttccgcaggctaaaatgacggcactcggcgattttaat
caggccatctatgcccatgcttcggtgcttcaggatgcagaaccattgtatgacctgtat
ggagcagaccagaccgagatgatttccctgacacgcagctatcgctcaacacaggagatt
gtagagtttacccgggggatggtagcagggggagagcatattgttccgtttaaccgtaag
ggtgagaagcctctggtaaccgaggtgaactcgcgtgaaaagctacaccaactgattgcc
gggaatgttacaaaattgctggcagagggttatgaatccatcgcagtgatctgtaaaaat
gctgatgaaagcgcggcagcctacgaagcactggaaggacaactgccagtaaagccaaaa
ttaattaagaaaacaacccctgcttttgaaaaggggattcatatcattccggcctacctg
gcgaaaggcgtggagtttgatgcggttctcatttatgacggatcagtccaagaataccag
cgtgagagtgagcgtaaattgttctacacggcctgtacgcgagcgatgcatttgctgcat
atatatagcataggggagattacgccattcgtgagttcgcaggaatcggagacgtatatc
cgtaaagtggaataa
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