Paenibacillus sp. lzh-N1: C0638_24760
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Entry
C0638_24760 CDS
T10344
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plzh Paenibacillus sp. lzh-N1
Pathway
plzh03030
DNA replication
plzh03410
Base excision repair
plzh03420
Nucleotide excision repair
plzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0638_24760
03410 Base excision repair
C0638_24760
03420 Nucleotide excision repair
C0638_24760
03440 Homologous recombination
C0638_24760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plzh03032
]
C0638_24760
03400 DNA repair and recombination proteins [BR:
plzh03400
]
C0638_24760
Enzymes [BR:
plzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0638_24760
DNA replication proteins [BR:
plzh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C0638_24760
DNA repair and recombination proteins [BR:
plzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C0638_24760
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0638_24760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AUO09511
LinkDB
All DBs
Position
complement(5571882..5574536)
Genome browser
AA seq
884 aa
AA seq
DB search
MDKLMLIDGNSIIYRAFFAMPPLTNSSGQQTNAVYGFTTMLLRLLEEHKPTHILVAFDAG
KITFRHKGYEDYKGGREKTPPELSQQFPLLKELLTAFGIAQFELDGYEADDIIGTLSRTA
DEAGFNVLVVTGDKDMLQLASDHVTVGLTRKGVTEVETYGPEQIQERYGLKPLQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLHQYGSVEEVLAHTDELKGKMKERVETHADDARMSKE
LATIYRDVTLDKQLEDVVFSGLQAETAGPALAKLEFKSLLERLSLSGEVGSAEVGVEEAA
ADVTVLDEERISELVEVLNNIDVLHVETHGDNPHHAEIVGLIFAATGRQFFMTLNVLQSD
AATPIREWLADPERKKRGHDLHRTDLALHWHGIEFAGAEFDVQLAGYLLDPTDANQTLSG
LAAKYGLSSIRPDDEVFGKGAKYKVPDVDVLSDHVARKAAVIEALVPVQQAELEKTEMHK
LFHELEMPLSRILADMEKQGILVNVEELRALGKEFEAQIATLVGEIYSIAGVEFNLNSPK
QLGEILFDKLGLPVIKKTKTGYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGLL
KEISEKTGKVHTYFRQTVAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSILAA
DYSQIELRVLADISDDERLKEAFVHDMDIHTKTASDVFGVPAEAVDSDMRRSAKAVNFGI
VYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVKTLLERRRY
LPEINASNFNQRSFAERTAMNTPIQGTAADIIKLAMVQMDAALRERNLRSRMLLQVHDEL
VFEVPPEEMEAMKELVPATMEAALKLAVPLKAEVSYGSNWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggataaactcatgcttatagatggtaacagtatcatataccgggcgttttttgctatg
ccgccattgacgaattcaagcggacagcagacgaacgcggtgtatggatttacgacaatg
ttattgcggcttttggaggagcacaaaccaacacatatcttggttgcctttgatgctggt
aaaattacgtttcgccataaagggtacgaggattacaaaggtggaagggagaaaacgccg
ccggagctgtcccagcaatttccgctgctgaaagagctattgaccgcctttggcattgcc
caatttgaactggatggctatgaggcagacgatattataggcaccctgtccagaacagcg
gacgaagcgggtttcaatgtgctggttgtgactggcgacaaggacatgcttcaattggct
tcagaccatgtcacggtcggcttaacccgcaaaggggttaccgaggtggaaacgtacgga
cctgagcagattcaggaacgttacggcttgaagccgctgcaaatcatagaccttaagggt
ctgatgggcgatacgtcggataatattcctggcattccgggcgtgggtgagaaaacagcg
ctcaagctgctgcatcaatatggttcagtcgaagaggtgctggcgcacacggatgagctg
aagggcaaaatgaaagaacgcgtggagacacatgctgacgatgcacgaatgagcaaggaa
ttggcgactatttatcgggatgtaacgttggacaaacagctggaagatgtagttttcagc
gggctacaggcagagacggctggaccagctctggcgaaactggagttcaagtccctgctg
gagcgtttatccttatcgggcgaggttggcagtgctgaagttggcgtagaggaagccgcg
gcagacgtgactgtgctggatgaagagcgtatcagcgaattggtagaagtgctgaataac
atagatgtgctgcatgtggagacgcatggtgataatccgcatcatgctgaaattgtaggc
ttaatatttgccgcaacggggcggcagttctttatgacactgaatgttctacaaagtgat
gcagctacccctattcgcgaatggcttgccgatcctgaacgcaaaaaacgcggtcatgat
ttgcaccgtacagacttggctttacactggcatggaattgagtttgccggagccgaattt
gatgtgcaactggccggatacttgctagacccgacagacgcgaatcagacgttgagtgga
ctggcagccaagtatggcttgtcatcgattcgtccagatgacgaagtgtttggtaaagga
gctaaatataaagttcctgacgtggatgtactatccgatcatgtggcacgtaaggcagcg
gtgatcgaagcattggtacccgtgcagcaggcggaactggaaaagacggaaatgcacaag
ctgttccatgagctggagatgccgttatcacgcattctggcggatatggagaagcagggg
attttggtgaatgtagaggaactgcgcgctttgggtaaagaatttgaagcccagattgca
acgttggtgggtgagatctacagcattgcaggggtagagttcaatcttaattcgcccaag
cagttgggtgagattttgtttgataaactgggtctgccagttattaaaaagacaaaaacc
gggtactcgaccgatgcagaggtactggaaaagcttgctccatatcatgatattgtgcaa
aatattttgcaatatcgcaccattgccaaactccaatcgacgtatgtcgaaggattgctt
aaagaaatttcggagaagacaggtaaagtgcatacgtatttccggcagacggttgcggca
accggacgcttgagcagtcaatttccgaatttgcagaatatcccgatccgtctcgaagaa
ggacgcaaaatccgcaaagtatttgttccctcggagccgggctggtcgattttggcggca
gactattcacaaatcgagctgcgggtgctggctgatatttcggatgatgagcgtttgaaa
gaggcttttgtccacgatatggacatccataccaagaccgcatccgatgtgttcggtgta
ccagcagaagctgtagattccgatatgcgtcgttccgcaaaggcggtcaactttgggatc
gtttacgggattagcgactatggtctgtcgcaaaatttgaatattacccggaaggaagcg
gctcgctttatcgaccagtattttgacgtgttccaaggtgttcgccgttacatggatgat
attgtgaaggatgcgaagagggatggatacgtaaaaacgctactggaacgcagacgatat
ttgcctgagattaacgccagcaatttcaaccagcgttcgttcgctgagcgtacagcgatg
aatacgccgattcaaggtaccgcagccgatattatcaagctggcgatggtgcagatggac
gcagcgctgcgtgaacgcaatcttcgcagccgcatgctgctacaagtacatgatgagctt
gtattcgaggttccgcctgaggaaatggaggcgatgaaagagcttgtcccggctaccatg
gaagctgcattaaaattggctgtaccgcttaaagcggaagtcagctatggcagcaattgg
tatgaggccaagtaa
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