Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0047
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Entry
Pro_0047 CDS
T00137
Symbol
hepA
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AAP99093
UniProt:
Q7VEG6
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Position
complement(46600..49788)
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AA seq
1062 aa
AA seq
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MTLLHATWISTNWHPSNLGQSELFLWADQWRVVTPKQIIQTPSPHPFSLSSDELKEWLNS
KKLLPNESINTSACLTLPSKPIHKKNNQKSKNQKTGIESEWKGLPLQAHEEIATQYECWP
WKVDGISLTTVEATEWLTKLPLSKKDSDLSEELLWWAHLERWSLNLIASGLWLPQVKLHK
KEGNEYRASWIPLLNQENERNRLEEFAKNIPLVAICAVPWIEAKGQIVNTEQVSNSNNNT
LSLYRPRHNRVEVMDLLEELIDAQLRKDFQPRTKNLDPLLKAWQEALGTKDGIINLSNEN
AKRLEKASKNWKRGLSSNVQPAKTCLELIAPIDDLDLWDLNFSLQSESDPSIRLAADQIW
EAGVEVTKVGGITIDNPSEILLEGLGRSLEIFPPIEKGLESPTPHTMKLSASEAFVLIRT
AAAKLRDMGIGVILPNSLSKGFASRLGLAIQAELPESSLGVMLGESLNWDWELMIGGINL
SMKELEMLAKKNSPLLNHKGTWIELRPNDLKNASKFFANTPELNLDKALRLSANKGNTFM
KLPVHHFESGPRLQSVLEQYHHQKAPEPLPAPNGFHGQLRPYQERGLGWLAFLYRFKQGA
CLADDMGLGKTIQLLCFIQHLKVQNELTKPVLLIAPTSVLTNWKREAATFTPELCIHEHY
GSKRHSSIPKLQNYLKKVDIMITSYGLLYRDGELLQEIDWQGIVIDEAQAIKNSKSKQSI
ITRAISKNLISNPFRIALTGTPVENRISELWALMDFLNPKVLGEEDFFNQRYKLPIEHYG
DISSLKDLKTQVSPFILRRLKTDQSIISDLPQKIELNEWVGLSQEQELLYKQTVEKSLDE
LASLPIGQRQGKTLGLLTRLKQICNHPAIALKETQVEKNFLLRSSKLQRLEEILQEVKES
HDRALLFTQFAEWGHLLQAYLQTKWESEVPFLHGGTPKGKRQEMIDRFQDDPRGPNIFLL
SLKAGGVGLNLTRANHVFHIDRWWNPAVENQATDRAYRIGQKKSVIVHKFITTGTIEEKI
NQMILEKTELAENIVGSGESWLGQLSLEKLSELVALDSNPEF
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgactctgctgcacgccacttggatttcaactaattggcatccatctaatttaggtcaa
tcagaattgttcctttgggcagaccaatggcgcgtagtaactccaaaacaaataatacaa
acaccttcacctcacccgtttagcctatcttcagatgaattaaaagaatggctcaatagc
aaaaaattattgcctaatgagagtattaatacatctgcatgtctcactcttcctagtaaa
cccattcacaaaaaaaataaccaaaaatctaagaatcaaaaaactggtattgaatctgaa
tggaagggactccctttacaagctcatgaagaaatagcaacacaatatgaatgttggcca
tggaaagtagatggaatttcactcactactgtcgaagcaacagaatggcttacaaaatta
cctttatcaaaaaaagattctgatcttagtgaagaattactttggtgggctcatttagag
cgttggtctcttaatctaattgcgagtggactatggctacctcaagttaaattacacaag
aaagaaggaaatgaatatcgtgcatcatggatacctctgctgaatcaagaaaatgaaaga
aatcgcttagaagagtttgcaaaaaatattcccttggtcgctatttgtgcagtcccatgg
atagaagctaaaggacaaatagtcaatactgagcaagtctcaaattcaaacaataataca
ctctctttatataggccaagacacaatcgcgtagaagtgatggatcttctcgaagaactt
attgatgcacaacttcgaaaagattttcaaccaagaactaaaaacttggatccattgtta
aaagcgtggcaagaagcacttggcacgaaagatggaataattaacctatcgaatgaaaac
gctaaaagattagaaaaagcaagtaagaattggaaaagagggttgtctagtaatgttcaa
cctgcgaaaacatgtctagagctaattgcaccgattgatgatctagatttatgggactta
aacttttcattgcaatcagaatcagatccgagtatcagactagctgcagatcaaatttgg
gaagcaggcgtagaagtaaccaaagttggcggaataacaattgacaacccaagtgaaatt
cttttagaaggcctaggaagaagtcttgaaattttccctccaattgaaaaaggactagaa
agcccaactcctcacacaatgaaactgtctgcatcagaagcatttgtacttattagaaca
gcagcagcaaaacttcgtgacatgggtattggtgtaatactgcctaatagtttgtccaaa
ggatttgcaagtcgacttggtcttgctattcaagccgaattaccagagtcttcactaggc
gtaatgctaggagaaagtttgaactgggattgggagttaatgatcggaggtataaattta
agcatgaaagaactagaaatgcttgcaaaaaaaaatagtcctctactcaatcacaaaggg
acatggatcgaattacgtcctaatgatctgaaaaatgcttcaaaattttttgctaatact
ccagaattaaacctcgataaagcattaaggcttagtgctaataaaggcaacacttttatg
aaacttccagtacatcattttgaatctggaccaagattacaaagtgtcttagagcaatat
caccatcagaaagcgcctgaacctttaccagcacctaatggattccatgggcaattaagg
ccttaccaagaaagaggtcttgggtggcttgcatttctttatcgttttaagcaaggagca
tgcttagcagatgacatggggcttggtaaaactattcaattattatgttttattcagcac
ctaaaagttcaaaacgagcttactaagcctgtactcctaattgcgcctacatctgtgctg
acaaattggaaaagagaggctgccacttttactccagaactatgtatacatgaacactat
ggtagtaagagacattcttcaataccaaaattacaaaattatctaaaaaaagttgacatt
atgatcacaagttatgggttactttatcgagatggcgagctgctacaagaaatcgactgg
caaggaatagttattgatgaagctcaagctattaaaaattccaaatcaaagcaaagtatt
ataactagagcaataagcaaaaatctcataagtaatccctttagaattgctttaacagga
acgccagtagaaaatcgtattagtgaactatgggcactaatggatttccttaatccaaaa
gtattaggtgaagaagatttttttaatcagcgatacaagttaccgattgagcattatggc
gacatctcttcattaaaagatctcaaaacacaggtcagtccttttattttaagaagattg
aaaaccgatcaatctattatttctgatttgcctcaaaagattgaattaaatgagtgggtt
ggactaagccaagagcaagagcttctatataaacaaacggtagagaaaagcttagatgaa
ctcgcctcattacccattggtcaacgccagggtaaaacattgggtctacttactcgtctt
aaacaaatttgtaatcatccagcaattgctttaaaagaaactcaagtcgagaagaatttc
ttattaagatcttcaaaattacaaagactggaagaaatactacaagaagtgaaagaatct
catgatagagctctgctctttactcaatttgctgaatgggggcatttattgcaagcgtac
ttacaaacaaaatgggaatcagaagtacctttcctacacggaggcactcctaaagggaag
cgacaagaaatgatagatcgttttcaagatgatcctagagggccaaatatctttttactt
tcactaaaagcaggaggagtgggtcttaatctaactcgtgcgaatcatgtttttcatatt
gatcgttggtggaatccagcagtagaaaatcaagcaacagatcgtgcataccgaattggt
caaaaaaaaagtgttatcgtccataagtttataaccaccggcacaatcgaagaaaaaatc
aatcaaatgattctcgaaaagactgaactagcagaaaatattgtcggatcaggagaaagc
tggttagggcaattaagtcttgaaaaattgagtgaattagttgctttagatagcaatcca
gaattctaa
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