Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0083
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Entry
Pro_0083 CDS
T00137
Symbol
csdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma00450
Selenocompound metabolism
pma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Pro_0083 (csdB)
Enzymes [BR:
pma01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Pro_0083 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Pro_0083 (csdB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAP99129
UniProt:
Q7VED0
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All DBs
Position
complement(93897..95150)
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AA seq
417 aa
AA seq
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MKSKKNLAEITRKDFELFSLGSQENNDLIYLDHAATSQKPKFVIERMVHYYKYENANVHR
GAHQLSAKATQAFEDAREITSQFVQAKSNREIVFTRNATEAINLVAYSWGDSQLKEGDEI
LITLMEHHSNLVPWQLLAKRKGCKLRYIGITKTGELDLNDLKNKVNEKTKLVCLLHVSNT
LGTCNPIKKISEIAHSAGALILIDACQSLAHKKINVEALDIDFLAGSSHKLCGPTGCGFL
WAKEEILEIMPPFLAGGEMIQDVSLQKSNWSDLPHKFEAGTPAIGEAIGMGAAISYLQSI
GLENIGLYEKELTQYLFKNLETIEGIRILGPTPEQQPNRAPLATFYIENIHSNDIAELLD
SKNICIRSGHHCCQPIHEYYGISSTARASLSFTSTKKEIDFFTQELMSSINFIKEHS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaaaagaatctagctgaaataacaagaaaggattttgaactcttttcttta
ggctctcaagaaaataatgatttaatttatttagatcatgcagcaactagtcaaaagcca
aaatttgtgattgagagaatggttcattattacaaatatgaaaatgcaaatgttcacaga
ggtgctcatcagttaagtgccaaagcaactcaggcatttgaagatgccagagaaataaca
tcacaatttgttcaagcaaagtcaaatagagaaattgtttttactcgcaatgcaactgaa
gcaattaatttagtcgcatattcatggggagattctcaattaaaagaaggagacgagata
ttgattactttaatggaacatcatagtaatcttgttccatggcaactactagcaaaaaga
aaaggttgtaagctgcgttatattggtataacaaaaacaggagaattagatctcaatgat
ctaaagaataaagtaaatgaaaaaactaaattagtatgccttcttcatgtcagtaataca
ttaggaacctgcaaccctattaaaaaaatctcagaaattgctcatagtgctggagcttta
atactcatagatgcttgccaaagccttgcccacaaaaaaataaatgttgaagcattagat
atagattttctagctggttcatctcataaattatgtggaccaacaggttgtggcttttta
tgggctaaagaagaaatattagaaataatgcctcctttcttagctggaggtgaaatgata
caagatgtttctcttcaaaaaagtaactggtccgatttaccacacaaatttgaagctgga
actcctgcaataggagaagctattggtatgggagcagcaatttcttatcttcagtctatt
ggtttagagaatataggtttatatgagaaagaactgacacaatacttgtttaaaaatcta
gaaactatagaaggaattagaattttaggtcccactcctgaacaacagcccaatcgtgca
cctttagcaaccttctatatagaaaatatacactctaatgatatagcagaattattagat
tcaaaaaatatttgtatcagaagtggccatcattgctgccaaccaattcatgaatactat
ggaataagctcaactgcgcgtgcaagtcttagctttacatcaacaaaaaaagaaatagat
ttttttactcaagaactgatgtccagtattaattttattaaggaacattcctaa
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