Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0370
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Entry
Pro_0370 CDS
T00137
Symbol
nei
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pro_0370 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_0370 (nei)
Enzymes [BR:
pma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pro_0370 (nei)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pro_0370 (nei)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pro_0370 (nei)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
MCR
Motif
Other DBs
NCBI-ProteinID:
AAP99416
UniProt:
Q7VDK6
LinkDB
All DBs
Position
complement(358620..359471)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVKRGLKNRLKDFYIHDVEVITPRSISSEGGSKAFVKNIIGLKSGEWTRRGK
YLICSLHSSDREEIAGWWVVHLRMTGQFQWFQKKTKSCKHTRVRIWNKDGAEIRFVDTRN
FGQMWWISPTFLPTEKITGLKKLGPEPFSKEFNPFYLQESLKKRKRSIKSSLLDQSIVAG
AGNIYADESLFQAGILPTKESKKLNKTEIKKICTSLTHILKISIGEGGTSFKDFRDLEGV
NGKYGGQAWVYGRENKPCRKCGVKILKAKVAGRGTHWCPNCQK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaacttccagaagtagaaacagttaaaagaggtctaaaaaataggctaaaggat
ttttatattcacgatgttgaagtaattacaccaagatctatatctagcgaaggaggatca
aaggcttttgttaaaaatatcattggcttaaagtcaggtgaatggacaaggagaggtaaa
tatttaatttgttctcttcattcctcagaccgagaagaaatagctgggtggtgggttgtt
catttaagaatgacaggccagtttcaatggttccaaaagaaaaccaaaagctgcaaacat
acaagagtaaggatatggaacaaagacggggccgaaattcgttttgttgatactagaaac
ttcggtcagatgtggtggatatctccaacatttttacctacagaaaaaataactggccta
aaaaaacttgggccagaacccttcagcaaagaattcaatcctttttaccttcaagaatct
ctcaaaaaaagaaaaagatcaataaaatcatctcttttagatcaatcaatagttgcaggt
gcagggaatatttatgctgatgaaagtctttttcaagctggtattctccctacgaaagaa
tcaaaaaagctcaataaaactgaaattaaaaagatatgcactagtcttacgcatatttta
aaaataagtattggggaaggaggaacatcttttaaagattttagagatttagaaggtgta
aatggaaaatatggtgggcaggcatgggtttacggacgagaaaacaagccctgtagaaaa
tgtggagttaaaatcttaaaggcaaaagtggctggtagaggtactcattggtgccccaat
tgccaaaaataa
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