Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0432
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Entry
Pro_0432 CDS
T00137
Symbol
topA
Name
(GenBank) Topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pma03032
]
Pro_0432 (topA)
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_0432 (topA)
Enzymes [BR:
pma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pro_0432 (topA)
DNA replication proteins [BR:
pma03032
]
Prokaryotic type
DNA Topoisomerases
Pro_0432 (topA)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pro_0432 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AAP99478
UniProt:
Q7VDE6
LinkDB
All DBs
Position
414514..417132
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AA seq
872 aa
AA seq
DB search
MPKGFQVIASMGHVRDLPKGASEIPAAMKKEKWSRIGVNTAEDFEPLYVVPKDKKKVVRE
LKSALKDAKEVLLATDEDREGESISWHLLELLKPKVPTKRMVFHEITKQAITKALQKTRD
LDMELVHAQETRRILDRLVGYTLSPLLWKKVAWGLSAGRVQSVSVRLLVKRERERRAFQR
ASYWDLKTILEKNNVPIEARLINYADQKIAKGSDFDEKTGKLKVGNKSNLLKEKEAKELV
TLLAADKWIVKSVDKKPTIRKPVPPFTTSTLQQEANRKMRLSARETMRCAQGLYERGFIT
YMRTDSVNLSEQAIRASRKCVELRYGKDYLSEAPRQFASSTRNAQEAHEAIRPAGETFRA
PNDTGLNGRDLALYELIWKRTVASQMAEARLTMLSVDISVRDAIFRASGKNIDFPGFFRA
YVEGSDDPEVALEGQEIVLPVLNVGDVLSPKSVDAMGHETKPPARYSEASLVKTLEKEGI
GRPSTYASIIGTIVDRGYASLSANSLAPTFTAFAVTSLLEEHFPDLVDTTFTARMESSLD
EISSGTVQWLPYLESFYKGRKGLAAQVDKREGDIDGKAYRKVDLEGIPCTVRIGSNGPWL
EGKRINEEGEEVDAKGNLPIDITPGDLDEEKVKQILDGPSDLGNHPDTGEKVYLRFGPWG
PFVQLGEALDKKEKPRRASLPKNIKTQELSLDEAVKLLSLPRLLGEHPDGGTIEARTGQF
GPYVVWDKGNGEKPDNRSLKKEDDVYEIDLKRAIELLAIPKLGRGGRMALRDLGVPKGGE
ENIHVYNGPYGLYVKQGKINASLPKGKGAEEITIEEAIQLLEVKKSSKTSSTTKKKSTTT
KKKSTTTKKKSTTTKTGRLRASQVKVIKPKDK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaagggttttcaagtgattgcttctatggggcatgttagggaccttccaaaaggt
gccagtgagattcctgctgctatgaagaaagaaaaatggtcaaggattggagttaataca
gcagaagattttgaacctttgtacgtagttccaaaagataagaagaaggtagtgagagaa
ttgaagtcagcattaaaagatgcaaaagaggttttattagcaactgatgaagatcgagag
ggggaaagtattagttggcatttgttggagctattgaagcccaaggttccaacaaaacga
atggtttttcatgaaattacaaaacaagctattaccaaagctctgcaaaaaaccagagac
cttgatatggaacttgtccatgctcaagagactagaagaattcttgatagattagttgga
tataccctttcaccacttttgtggaagaaagttgcatggggactttctgctggtcgtgtt
cagtctgtttcagtaagactattggttaaacgtgaaagagaaaggagggcctttcaacga
gcaagttattgggatctgaaaacaattcttgaaaaaaataatgttcctattgaagcgcgt
ttgattaattatgctgatcaaaagattgccaaagggagtgattttgatgaaaaaacgggg
aagcttaaagtgggaaacaaatcaaatttgcttaaggaaaaggaagcaaaagagctggta
actttattggcagcagacaagtggatagttaaatctgtagataaaaaaccaactattagg
aagcctgttcctccgtttacaacaagtactttgcaacaggaggccaataggaagatgagg
ctttccgctagagaaacaatgcgttgcgctcaaggcttgtatgaacgagggtttatcaca
tatatgagaacagattctgtaaacttgtcggaacaagcaattagggcttctagaaaatgt
gttgaattgcgctatggaaaagattatctaagtgaagcccctagacaatttgcttcaagc
acaagaaatgcacaagaagctcatgaggctattagacccgcaggagaaacttttagagct
ccaaatgatacaggactaaatggtcgtgatttggctttgtatgagctgatatggaaaagg
actgttgctagtcagatggcggaagctcgtttgacaatgctttcggtggatatcagtgtt
cgagatgcgattttcagagcatcgggtaaaaatattgatttccctggttttttcagagct
tatgttgagggtagtgatgacccagaagttgctttagagggacaggaaattgttttacct
gttctcaacgtaggtgatgtgctctctcctaagtcagttgatgctatgggacatgaaacg
aaacctcccgctcgttatagcgaagcatctttagtaaagactttagaaaaagagggaatt
ggaagaccttctacttacgcaagcattattggaacgattgttgatagagggtatgcatct
ttgagtgctaattctcttgcacctacttttacagcctttgcagtaacgtctcttttagaa
gagcatttccctgatttagtagatactacatttacagctcgcatggaatcttctctagat
gagatttcttctggcacggttcagtggcttccttatctagaatctttttataaaggtaga
aaggggttggctgcgcaggttgataagagagaaggtgatattgatgggaaagcttataga
aaagttgaccttgaggggatcccttgcacagttcgcattgggtctaatggaccctggctg
gaagggaagaggattaatgaggaaggtgaagaagttgatgcaaaagggaatttgccaata
gatattacccccggagatcttgatgaagagaaagtcaagcaaatattggatggtccttca
gatcttggaaatcaccctgatacaggcgaaaaagtttatcttcgctttggtccatgggga
ccatttgttcaacttggagaagctttagataaaaaagaaaaacctcgccgtgcatcactt
cctaaaaatataaaaactcaagaactgtctttagatgaagctgtaaagcttttaagtttg
cctcgcttacttggagaacaccctgatggtggaacaattgaagctcgtacagggcagttc
ggaccatatgttgtttgggataaaggtaatggtgaaaaacctgataatcgttctctaaaa
aaagaagatgatgtatatgaaattgatttaaagagagctattgaacttttagcaatacct
aaacttgggcggggaggacgaatggccttaagagatttaggtgtacctaaaggaggagaa
gaaaatattcatgtttataacggaccttatggtctttatgttaagcaggggaagataaat
gcatctttaccaaaagggaagggtgctgaagaaattacaattgaggaagctatccaatta
ttagaggtaaagaaatcaagtaaaacatcttcaacaacaaagaaaaaaagtacaacaaca
aagaaaaagagtacaacaacaaagaaaaaaagtacaacaacaaagacaggtcgtttaaga
gcaagtcaagtaaaggttattaagccaaaagataagtaa
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